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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182279841
OHUV01000825
196621
Bacillota
GTC
Asp
>WENV182279591
OHUV01000154
158247
Bacillota
>WENV182279619
OHUV01000186
144612
Bacillota
TCT
Arg
>WENV182279929
OHUV01001307
144612
Bacillota
TCT
Arg
>WENV182279761
OHUV01000496
235098
Bacillota
GAC
Val
>WENV182280155
OHUV01016118
235154
Bacillota
GTT
Asn
>WENV182279678
OHUV01000284
37071
Bacillota
TGA
Ser
>WENV182279799
OHUV01000627
304022
Bacillota
GCC
Gly
>WENV182280169
OHUV01019342
307003
Bacillota
TGC
Ala
>WENV182279873
OHUV01001009
59312
Bacillota
CAG
Leu
>WENV182279858
OHUV01000922
238910
Bacillota
CTT
Lys
>WENV182279508
OHUV01000062
338147
Bacillota
CTC
Glu
>WENV182279546
OHUV01000105
338147
Bacillota
CTC
Glu
>WENV182279471
OHUV01000045
235114
Bacillota
TTT
Lys
>WENV182280013
OHUV01003043
313454
Bacillota
GAA
Phe
>WENV182279872
OHUV01001009
44859
Bacillota
AAG
Leu
>WENV182279779
OHUV01000573
11034
Bacillota
GGA
Ser
>WENV182279798
OHUV01000627
235079
Bacillota
GAA
Phe
>WENV182279822
OHUV01000741
338149
Bacillota
CTC
Glu
>WENV182279454
OHUV01000031
245298
Bacillota
CGG
Pro
>WENV182280180
OHUV01021421
37269
Bacillota
TGA
Ser
>WENV182280064
OHUV01005624
413152
Bacillota
TCC
Gly
>WENV182279636
OHUV01000203
152149
Bacillota
GTG
His
>WENV182280087
OHUV01007139
162445
Bacillota
CAT
Met
>WENV182280192
OHUV01024596
152492
Bacillota
GGG
Pro
>WENV182279990
OHUV01002465
144610
Bacillota
GTG
His
>WENV182279453
OHUV01000031
411547
Bacillota
CTG
Gln
>WENV182279571
OHUV01000129
411547
Bacillota
CTG
Gln
>WENV182280042
OHUV01004442
147684
Bacillota
ACG
Arg
>WENV182279959
OHUV01001625
412387
Bacillota
GCA
Cys
>WENV182279842
OHUV01000825
235095
Bacillota
GGT
Thr
>WENV182279851
OHUV01000903
235095
Bacillota
GGT
Thr
>WENV182279455
OHUV01000031
411549
Bacillota
TTG
Gln
>WENV182279554
OHUV01000111
235142
Bacillota
CTT
Lys
>WENV182279644
OHUV01000227
235142
Bacillota
CTT
Lys
>WENV182279712
OHUV01000378
148188
Bacillota
CCG
Arg
>WENV182280123
OHUV01011464
80612
Bacillota
GTA
Tyr
>WENV182279729
OHUV01000414
163943
Bacillota
GTC
Asp
>WENV182279732
OHUV01000419
235124
Bacillota
TGG
Pro
>WENV182279935
OHUV01001349
338129
Bacillota
TGT
Thr
>WENV182279957
OHUV01001604
144583
Bacillota
ACG
Arg
>WENV182280054
OHUV01004645
247734
Bacillota
TGC
Ala
>WENV182280052
OHUV01004633
238974
Bacillota
GAA
Phe
>WENV182279823
OHUV01000741
144621
Bacillota
GTT
Asn
>WENV182279709
OHUV01000363
144621
Bacillota
GTT
Asn
>WENV182279470
OHUV01000045
235113
Bacillota
GAA
Phe
>WENV182279846
OHUV01000866
58712
Bacillota
CAG
Leu
>WENV182280223
OHUV01033327
144762
Bacillota
TCT
Arg
>WENV182279626
OHUV01000198
245296
Bacillota
CCC
Gly
>WENV182280168
OHUV01019018
198135
Bacillota
GAT
Ile
>WENV182279989
OHUV01002465
157635
Bacillota
TCT
Arg
>WENV182280167
OHUV01019018
299139
Bacillota
TGC
Ala
>WENV182279698
OHUV01000340
144594
Bacillota
CAC
Val
>WENV182279507
OHUV01000062
95563
Bacillota
GTA
Tyr
>WENV182280061
OHUV01005336
272488
Bacillota
GAA
Phe
>WENV182280239
OHUV01041009
238857
Bacillota
CCA
Trp
>WENV182279877
OHUV01001021
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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