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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182279427
OHUV01000015
119661
Verrucomicrobiota
CAA
Leu
>WENV182279539
OHUV01000095
155256
Verrucomicrobiota
TCT
Arg
>WENV182279393
OHUV01000003
246701
Verrucomicrobiota
TTT
Lys
>WENV182279413
OHUV01000012
345141
Verrucomicrobiota
TTG
Gln
>WENV182279577
OHUV01000141
345133
Verrucomicrobiota
GAC
Val
>WENV182279633
OHUV01000202
82054
Verrucomicrobiota
GTA
Tyr
>WENV182279532
OHUV01000079
246677
Verrucomicrobiota
CTT
Lys
>WENV182279509
OHUV01000063
344844
Verrucomicrobiota
GCA
Cys
>WENV182279527
OHUV01000076
155264
Verrucomicrobiota
GGG
Pro
>WENV182279414
OHUV01000012
344845
Verrucomicrobiota
CTG
Gln
>WENV182279415
OHUV01000012
128202
Verrucomicrobiota
GTC
Asp
>WENV182279528
OHUV01000076
414625
Verrucomicrobiota
CCC
Gly
>WENV182279481
OHUV01000048
46246
Verrucomicrobiota
TGA
Ser
>WENV182279428
OHUV01000015
97755
Verrucomicrobiota
TAG
Leu
>WENV182279483
OHUV01000048
246700
Verrucomicrobiota
TTC
Glu
>WENV182279510
OHUV01000063
246700
Verrucomicrobiota
TTC
Glu
>WENV182279512
OHUV01000063
246687
Verrucomicrobiota
CGC
Ala
>WENV182279524
OHUV01000076
419909
Verrucomicrobiota
TCC
Gly
>WENV182279679
OHUV01000286
344841
Verrucomicrobiota
CAC
Val
>WENV182279482
OHUV01000048
405704
Verrucomicrobiota
GCC
Gly
>WENV182279520
OHUV01000073
405704
Verrucomicrobiota
GCC
Gly
>WENV182279452
OHUV01000029
60880
Verrucomicrobiota
CAG
Leu
>WENV182279741
OHUV01000448
82056
Verrucomicrobiota
TAA
Leu
>WENV182279531
OHUV01000079
344842
Verrucomicrobiota
CGT
Thr
>WENV182279547
OHUV01000107
170105
Verrucomicrobiota
CAT
Met
>WENV182279451
OHUV01000029
287733
Verrucomicrobiota
CCA
Trp
>WENV182279511
OHUV01000063
345123
Verrucomicrobiota
TGT
Thr
>WENV182279429
OHUV01000015
345110
Verrucomicrobiota
CCT
Arg
>WENV182279484
OHUV01000048
344839
Verrucomicrobiota
GTG
His
>WENV182279803
OHUV01000656
7274
Verrucomicrobiota
CGA
Ser
>WENV182279742
OHUV01000448
246260
Verrucomicrobiota
>WENV182279533
OHUV01000079
155268
Verrucomicrobiota
CGG
Pro
>WENV182279521
OHUV01000073
82181
Verrucomicrobiota
AAG
Leu
>WENV182279525
OHUV01000076
246728
Verrucomicrobiota
GAA
Phe
>WENV182279743
OHUV01000448
7256
Verrucomicrobiota
GCT
Ser
>WENV182279480
OHUV01000048
345115
Verrucomicrobiota
CAT
Met
>WENV182279576
OHUV01000141
345119
Verrucomicrobiota
TAC
Val
>WENV182279904
OHUV01001162
345124
Verrucomicrobiota
GTT
Asn
>WENV182279572
OHUV01000133
17023
Verrucomicrobiota
GGA
Ser
>WENV182279703
OHUV01000352
345142
Verrucomicrobiota
CCG
Arg
>WENV182279485
OHUV01000048
246709
Verrucomicrobiota
CAT
Met
>WENV182279526
OHUV01000076
154693
Verrucomicrobiota
TGG
Pro
>WENV182279450
OHUV01000029
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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