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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182283368
OHVJ01027164
196621
Bacillota
GTC
Asp
>WENV182283039
OHVJ01000727
144612
Bacillota
TCT
Arg
>WENV182283097
OHVJ01001665
144612
Bacillota
TCT
Arg
>WENV182283342
OHVJ01020950
235134
Bacillota
GAA
Phe
>WENV182283306
OHVJ01016218
338152
Bacillota
TTC
Glu
>WENV182283201
OHVJ01005780
44854
Bacillota
TGA
Ser
>WENV182283238
OHVJ01008450
235154
Bacillota
GTT
Asn
>WENV182283332
OHVJ01019025
144577
Bacillota
GAT
Ile
>WENV182282955
OHVJ01000249
37071
Bacillota
TGA
Ser
>WENV182283061
OHVJ01000927
304022
Bacillota
GCC
Gly
>WENV182282882
OHVJ01000058
59312
Bacillota
CAG
Leu
>WENV182282904
OHVJ01000076
338147
Bacillota
CTC
Glu
>WENV182282877
OHVJ01000053
338147
Bacillota
CTC
Glu
>WENV182282884
OHVJ01000063
338147
Bacillota
CTC
Glu
>WENV182283023
OHVJ01000628
235114
Bacillota
TTT
Lys
>WENV182283365
OHVJ01026648
429429
Bacillota
CCA
Trp
>WENV182282909
OHVJ01000088
44859
Bacillota
AAG
Leu
>WENV182283271
OHVJ01011105
11034
Bacillota
GGA
Ser
>WENV182282818
OHVJ01000006
235079
Bacillota
GAA
Phe
>WENV182283060
OHVJ01000927
235079
Bacillota
GAA
Phe
>WENV182283331
OHVJ01019025
235087
Bacillota
TGC
Ala
>WENV182283323
OHVJ01017877
199366
Bacillota
CAT
Met
>WENV182283321
OHVJ01017557
338149
Bacillota
CTC
Glu
>WENV182283384
OHVJ01035313
144766
Bacillota
CAT
Met
>WENV182283262
OHVJ01010648
245298
Bacillota
CGG
Pro
>WENV182283303
OHVJ01015255
37269
Bacillota
TGA
Ser
>WENV182282816
OHVJ01000006
235078
Bacillota
TAC
Val
>WENV182282932
OHVJ01000145
144610
Bacillota
GTG
His
>WENV182283343
OHVJ01020950
240017
Bacillota
GCC
Gly
>WENV182283261
OHVJ01010648
411547
Bacillota
CTG
Gln
>WENV182283356
OHVJ01024546
147684
Bacillota
ACG
Arg
>WENV182283202
OHVJ01005780
4624
Bacillota
GCT
Ser
>WENV182283369
OHVJ01027164
235095
Bacillota
GGT
Thr
>WENV182283358
OHVJ01024580
344183
Bacillota
CTG
Gln
>WENV182283121
OHVJ01002425
419639
Bacillota
GCA
Cys
>WENV182283295
OHVJ01014465
411549
Bacillota
TTG
Gln
>WENV182282874
OHVJ01000048
235142
Bacillota
CTT
Lys
>WENV182282914
OHVJ01000098
235142
Bacillota
CTT
Lys
>WENV182283170
OHVJ01004128
80612
Bacillota
GTA
Tyr
>WENV182283227
OHVJ01007688
235124
Bacillota
TGG
Pro
>WENV182283386
OHVJ01035313
163753
Bacillota
TGG
Pro
>WENV182283091
OHVJ01001520
241526
Bacillota
CTT
Lys
>WENV182282855
OHVJ01000027
235113
Bacillota
GAA
Phe
>WENV182283022
OHVJ01000628
235113
Bacillota
GAA
Phe
>WENV182283333
OHVJ01019429
58712
Bacillota
CAG
Leu
>WENV182283337
OHVJ01019939
245296
Bacillota
CCC
Gly
>WENV182283355
OHVJ01024531
144594
Bacillota
CAC
Val
>WENV182283020
OHVJ01000628
95563
Bacillota
GTA
Tyr
>WENV182282868
OHVJ01000045
338127
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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