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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182282937
OHVJ01000151
339412
Bacteroidota
GGT
Thr
>WENV182283133
OHVJ01002885
146761
Bacteroidota
GAT
Ile
>WENV182283382
OHVJ01034069
243025
Bacteroidota
CAT
Met
>WENV182282902
OHVJ01000075
97336
Bacteroidota
CAG
Leu
>WENV182283092
OHVJ01001529
58715
Bacteroidota
GAG
Leu
>WENV182283052
OHVJ01000807
95618
Bacteroidota
TAG
Leu
>WENV182282802
OHVJ01000002
394247
Bacteroidota
CTC
Glu
>WENV182282864
OHVJ01000035
144695
Bacteroidota
CAT
Met
>WENV182283000
OHVJ01000477
412479
Bacteroidota
TTG
Gln
>WENV182282883
OHVJ01000062
155123
Bacteroidota
GTT
Asn
>WENV182283128
OHVJ01002683
144688
Bacteroidota
CAT
Met
>WENV182282965
OHVJ01000299
37076
Bacteroidota
TAA
Leu
>WENV182283011
OHVJ01000569
37076
Bacteroidota
TAA
Leu
>WENV182283366
OHVJ01026768
181746
Bacteroidota
GGC
Ala
>WENV182282896
OHVJ01000070
136207
Bacteroidota
TAC
Val
>WENV182283314
OHVJ01017063
80607
Bacteroidota
GTA
Tyr
>WENV182282952
OHVJ01000219
419272
Bacteroidota
CTG
Gln
>WENV182283277
OHVJ01011978
338314
Bacteroidota
CCT
Arg
>WENV182283334
OHVJ01019479
139743
Bacteroidota
GGG
Pro
>WENV182282943
OHVJ01000163
238606
Bacteroidota
CGG
Pro
>WENV182283115
OHVJ01002362
338165
Bacteroidota
GGT
Thr
>WENV182282851
OHVJ01000022
238607
Bacteroidota
TTT
Lys
>WENV182283136
OHVJ01003068
19317
Bacteroidota
GGA
Ser
>WENV182283251
OHVJ01009478
353927
Bacteroidota
TTC
Glu
>WENV182282803
OHVJ01000002
146762
Bacteroidota
TGG
Pro
>WENV182282903
OHVJ01000075
59498
Bacteroidota
GAG
Leu
>WENV182282966
OHVJ01000308
55270
Bacteroidota
TGA
Ser
>WENV182282942
OHVJ01000163
313363
Bacteroidota
GAA
Phe
>WENV182283007
OHVJ01000552
313363
Bacteroidota
GAA
Phe
>WENV182283102
OHVJ01001819
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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