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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182294559
OHWE01000010
243025
Bacteroidota
CAT
Met
>WENV182294639
OHWE01000092
17323
Bacteroidota
GGA
Ser
>WENV182294773
OHWE01000587
415410
Bacteroidota
TTG
Gln
>WENV182294546
OHWE01000006
344692
Bacteroidota
GGT
Thr
>WENV182294729
OHWE01000310
126641
Bacteroidota
TAC
Val
>WENV182294903
OHWE01002592
338132
Bacteroidota
GCA
Cys
>WENV182294832
OHWE01001221
280660
Bacteroidota
CCA
Trp
>WENV182294916
OHWE01002740
235207
Bacteroidota
CAT
Met
>WENV182294879
OHWE01001924
52358
Bacteroidota
TGA
Ser
>WENV182294820
OHWE01001087
154643
Bacteroidota
CAT
Met
>WENV182295171
OHWE01024306
95559
Bacteroidota
TAG
Leu
>WENV182294824
OHWE01001152
132360
Bacteroidota
GGG
Pro
>WENV182294886
OHWE01002224
425638
Bacteroidota
CTG
Gln
>WENV182294841
OHWE01001392
239647
Bacteroidota
TTT
Lys
>WENV182294961
OHWE01003893
353927
Bacteroidota
TTC
Glu
>WENV182294553
OHWE01000008
414426
Bacteroidota
CTG
Gln
>WENV182294843
OHWE01001416
414426
Bacteroidota
CTG
Gln
>WENV182294770
OHWE01000559
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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