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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182302223
OHWS01002248
196621
Bacillota
GTC
Asp
>WENV182301951
OHWS01000010
158247
Bacillota
>WENV182302135
OHWS01000791
144612
Bacillota
TCT
Arg
>WENV182302198
OHWS01001683
235098
Bacillota
GAC
Val
>WENV182302484
OHWS01033332
250201
Bacillota
TGC
Ala
>WENV182302118
OHWS01000637
44854
Bacillota
TGA
Ser
>WENV182302127
OHWS01000712
37071
Bacillota
TGA
Ser
>WENV182301988
OHWS01000045
59312
Bacillota
CAG
Leu
>WENV182301993
OHWS01000056
59312
Bacillota
CAG
Leu
>WENV182302117
OHWS01000628
238910
Bacillota
CTT
Lys
>WENV182301952
OHWS01000011
338147
Bacillota
CTC
Glu
>WENV182301953
OHWS01000011
338147
Bacillota
CTC
Glu
>WENV182301954
OHWS01000011
338147
Bacillota
CTC
Glu
>WENV182301990
OHWS01000048
338147
Bacillota
CTC
Glu
>WENV182302066
OHWS01000217
338147
Bacillota
CTC
Glu
>WENV182302212
OHWS01002032
340802
Bacillota
TTG
Gln
>WENV182302004
OHWS01000090
293599
Bacillota
CTT
Lys
>WENV182302010
OHWS01000093
235114
Bacillota
TTT
Lys
>WENV182302131
OHWS01000761
429429
Bacillota
CCA
Trp
>WENV182302332
OHWS01007607
41154
Bacillota
TAA
Leu
>WENV182302126
OHWS01000685
11034
Bacillota
GGA
Ser
>WENV182302211
OHWS01002032
156937
Bacillota
GTG
His
>WENV182302190
OHWS01001503
274189
Bacillota
TGT
Thr
>WENV182302299
OHWS01005175
274189
Bacillota
TGT
Thr
>WENV182301972
OHWS01000026
295714
Bacillota
GCC
Gly
>WENV182302111
OHWS01000573
338149
Bacillota
CTC
Glu
>WENV182302100
OHWS01000487
245298
Bacillota
CGG
Pro
>WENV182302338
OHWS01008051
37269
Bacillota
TGA
Ser
>WENV182301971
OHWS01000024
152149
Bacillota
GTG
His
>WENV182302024
OHWS01000125
100326
Bacillota
GTA
Tyr
>WENV182302008
OHWS01000093
144610
Bacillota
GTG
His
>WENV182302099
OHWS01000487
411547
Bacillota
CTG
Gln
>WENV182302367
OHWS01010467
147684
Bacillota
ACG
Arg
>WENV182302119
OHWS01000637
4624
Bacillota
GCT
Ser
>WENV182302251
OHWS01003270
412387
Bacillota
GCA
Cys
>WENV182302047
OHWS01000174
235095
Bacillota
GGT
Thr
>WENV182302026
OHWS01000132
411549
Bacillota
TTG
Gln
>WENV182302327
OHWS01007394
411549
Bacillota
TTG
Gln
>WENV182301983
OHWS01000040
235142
Bacillota
CTT
Lys
>WENV182302027
OHWS01000135
235142
Bacillota
CTT
Lys
>WENV182302221
OHWS01002137
148188
Bacillota
CCG
Arg
>WENV182302065
OHWS01000214
235124
Bacillota
TGG
Pro
>WENV182302165
OHWS01001102
338129
Bacillota
TGT
Thr
>WENV182302173
OHWS01001254
144583
Bacillota
ACG
Arg
>WENV182302112
OHWS01000573
144621
Bacillota
GTT
Asn
>WENV182301991
OHWS01000050
235113
Bacillota
GAA
Phe
>WENV182302152
OHWS01000895
58712
Bacillota
CAG
Leu
>WENV182302071
OHWS01000235
245296
Bacillota
CCC
Gly
>WENV182302253
OHWS01003347
272992
Bacillota
CTT
Lys
>WENV182302470
OHWS01030141
198135
Bacillota
GAT
Ile
>WENV182302428
OHWS01019171
343021
Bacillota
CAT
Met
>WENV182302373
OHWS01011496
144594
Bacillota
CAC
Val
>WENV182302025
OHWS01000131
95563
Bacillota
GTA
Tyr
>WENV182302432
OHWS01020424
272488
Bacillota
GAA
Phe
>WENV182302172
OHWS01001233
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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