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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182305383
OHXB01012275
235097
Bacteroidota
TTT
Lys
>WENV182305629
OHXB01048376
95987
Bacteroidota
CAA
Leu
>WENV182305417
OHXB01015056
339412
Bacteroidota
GGT
Thr
>WENV182305614
OHXB01043306
235102
Bacteroidota
CGT
Thr
>WENV182305241
OHXB01003132
243025
Bacteroidota
CAT
Met
>WENV182305289
OHXB01005012
394247
Bacteroidota
CTC
Glu
>WENV182305329
OHXB01007186
136244
Bacteroidota
TAC
Val
>WENV182305199
OHXB01002091
237797
Bacteroidota
CCA
Trp
>WENV182305167
OHXB01001489
436206
Bacteroidota
TTG
Gln
>WENV182305171
OHXB01001627
412479
Bacteroidota
TTG
Gln
>WENV182305402
OHXB01013759
338124
Bacteroidota
CCG
Arg
>WENV182305354
OHXB01009481
338132
Bacteroidota
GCA
Cys
>WENV182305599
OHXB01040844
37076
Bacteroidota
TAA
Leu
>WENV182305564
OHXB01034762
144596
Bacteroidota
GGC
Ala
>WENV182305309
OHXB01006225
80607
Bacteroidota
GTA
Tyr
>WENV182305249
OHXB01003246
113604
Bacteroidota
>WENV182305223
OHXB01002605
412235
Bacteroidota
>WENV182305548
OHXB01032176
175704
Bacteroidota
TGC
Ala
>WENV182305259
OHXB01003798
144590
Bacteroidota
GTT
Asn
>WENV182305285
OHXB01004798
95559
Bacteroidota
TAG
Leu
>WENV182305528
OHXB01028496
144655
Bacteroidota
GGC
Ala
>WENV182305184
OHXB01001745
139743
Bacteroidota
GGG
Pro
>WENV182305355
OHXB01009525
425638
Bacteroidota
CTG
Gln
>WENV182305212
OHXB01002373
146764
Bacteroidota
GTC
Asp
>WENV182305204
OHXB01002143
55270
Bacteroidota
TGA
Ser
>WENV182305295
OHXB01005075
16224
Bacteroidota
GGA
Ser
>WENV182305407
OHXB01014121
16220
Bacteroidota
GGA
Ser
>WENV182305308
OHXB01006212
127023
Bacteroidota
GGG
Pro
>WENV182305266
OHXB01003936
338125
Bacteroidota
CCT
Arg
>WENV182305208
OHXB01002226
313363
Bacteroidota
GAA
Phe
>WENV182305403
OHXB01013769
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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