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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182306937
OHXD01008435
119475
Actinomycetota
TAA
Leu
>WENV182306816
OHXD01002836
235153
Actinomycetota
CCT
Arg
>WENV182306769
OHXD01001891
144589
Actinomycetota
ACG
Arg
>WENV182306823
OHXD01003221
37070
Actinomycetota
CGA
Ser
>WENV182307058
OHXD01023214
245301
Actinomycetota
GCC
Gly
>WENV182306632
OHXD01000402
16219
Actinomycetota
GCT
Ser
>WENV182306500
OHXD01000009
235174
Actinomycetota
TGC
Ala
>WENV182306733
OHXD01001426
235101
Actinomycetota
TTT
Lys
>WENV182306708
OHXD01001119
144625
Actinomycetota
GTC
Asp
>WENV182306867
OHXD01004286
153948
Actinomycetota
GGG
Pro
>WENV182306749
OHXD01001613
198659
Actinomycetota
TAC
Val
>WENV182306822
OHXD01003165
16223
Actinomycetota
GAG
Leu
>WENV182306758
OHXD01001683
144593
Actinomycetota
TAT
Ile
>WENV182306996
OHXD01014835
144636
Actinomycetota
GAT
Ile
>WENV182306651
OHXD01000597
98279
Actinomycetota
GTA
Tyr
>WENV182306690
OHXD01000896
338148
Actinomycetota
CTG
Gln
>WENV182306921
OHXD01007688
235148
Actinomycetota
GTT
Asn
>WENV182306912
OHXD01007244
176456
Actinomycetota
TCT
Arg
>WENV182307074
OHXD01025138
144907
Actinomycetota
GGG
Pro
>WENV182306616
OHXD01000336
411554
Actinomycetota
CCC
Gly
>WENV182306635
OHXD01000462
113601
Actinomycetota
TAG
Leu
>WENV182306872
OHXD01005042
144595
Actinomycetota
CAA
Leu
>WENV182306883
OHXD01005977
145343
Actinomycetota
GGG
Pro
>WENV182306655
OHXD01000633
235149
Actinomycetota
CCT
Arg
>WENV182306947
OHXD01009637
414234
Actinomycetota
CTG
Gln
>WENV182306791
OHXD01002250
153915
Actinomycetota
ACG
Arg
>WENV182306634
OHXD01000462
235121
Actinomycetota
CGT
Thr
>WENV182306498
OHXD01000009
80622
Actinomycetota
CAG
Leu
>WENV182306629
OHXD01000381
44851
Actinomycetota
TGA
Ser
>WENV182307006
OHXD01016331
158513
Actinomycetota
TGG
Pro
>WENV182306501
OHXD01000009
235173
Actinomycetota
GGC
Ala
>WENV182306821
OHXD01003080
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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