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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182307495
OHXF01000086
243025
Bacteroidota
CAT
Met
>WENV182307509
OHXF01000116
17323
Bacteroidota
GGA
Ser
>WENV182307620
OHXF01001006
436206
Bacteroidota
TTG
Gln
>WENV182307581
OHXF01000475
344692
Bacteroidota
GGT
Thr
>WENV182307896
OHXF01024415
338124
Bacteroidota
CCG
Arg
>WENV182307900
OHXF01025490
301449
Bacteroidota
CGG
Pro
>WENV182307638
OHXF01001504
141414
Bacteroidota
GGG
Pro
>WENV182307700
OHXF01003769
113604
Bacteroidota
>WENV182307755
OHXF01006351
154643
Bacteroidota
CAT
Met
>WENV182307738
OHXF01005524
95559
Bacteroidota
TAG
Leu
>WENV182307678
OHXF01002871
425638
Bacteroidota
CTG
Gln
>WENV182307774
OHXF01008033
16220
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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