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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182313115
OHXX01037550
344692
Bacteroidota
GGT
Thr
>WENV182313072
OHXX01021183
338124
Bacteroidota
CCG
Arg
>WENV182312962
OHXX01006054
338132
Bacteroidota
GCA
Cys
>WENV182313068
OHXX01019653
301449
Bacteroidota
CGG
Pro
>WENV182312998
OHXX01009895
143169
Bacteroidota
GGG
Pro
>WENV182312759
OHXX01000206
425638
Bacteroidota
CTG
Gln
>WENV182312756
OHXX01000196
94703
Bacteroidota
GTA
Tyr
>WENV182313040
OHXX01016812
353927
Bacteroidota
TTC
Glu
>WENV182313041
OHXX01016991
414426
Bacteroidota
CTG
Gln
>WENV182312866
OHXX01001524
56823
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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