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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182314035
OHXZ01020347
235097
Bacteroidota
TTT
Lys
>WENV182314016
OHXZ01017339
339412
Bacteroidota
GGT
Thr
>WENV182313950
OHXZ01011385
235102
Bacteroidota
CGT
Thr
>WENV182313932
OHXZ01010313
267954
Bacteroidota
GCC
Gly
>WENV182313933
OHXZ01010313
267954
Bacteroidota
GCC
Gly
>WENV182313935
OHXZ01010321
237796
Bacteroidota
CGT
Thr
>WENV182314026
OHXZ01019392
413663
Bacteroidota
CTG
Gln
>WENV182313890
OHXZ01006657
436206
Bacteroidota
TTG
Gln
>WENV182313777
OHXZ01002531
155123
Bacteroidota
GTT
Asn
>WENV182313876
OHXZ01006192
412235
Bacteroidota
>WENV182314087
OHXZ01030868
144590
Bacteroidota
GTT
Asn
>WENV182313852
OHXZ01005052
95986
Bacteroidota
GTA
Tyr
>WENV182314118
OHXZ01038570
185921
Bacteroidota
GTC
Asp
>WENV182313896
OHXZ01006905
55270
Bacteroidota
TGA
Ser
>WENV182313973
OHXZ01013585
16220
Bacteroidota
GGA
Ser
>WENV182313785
OHXZ01002731
127023
Bacteroidota
GGG
Pro
>WENV182313801
OHXZ01003153
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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