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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182315870
OHYC01004397
119475
Actinomycetota
TAA
Leu
>WENV182315954
OHYC01009121
144589
Actinomycetota
ACG
Arg
>WENV182315782
OHYC01001621
37070
Actinomycetota
CGA
Ser
>WENV182315763
OHYC01001397
235092
Actinomycetota
CCG
Arg
>WENV182315580
OHYC01000199
16219
Actinomycetota
GCT
Ser
>WENV182315733
OHYC01001037
235174
Actinomycetota
TGC
Ala
>WENV182315608
OHYC01000304
235101
Actinomycetota
TTT
Lys
>WENV182315727
OHYC01000991
144625
Actinomycetota
GTC
Asp
>WENV182315871
OHYC01004426
153948
Actinomycetota
GGG
Pro
>WENV182315708
OHYC01000882
198659
Actinomycetota
TAC
Val
>WENV182315950
OHYC01008797
16223
Actinomycetota
GAG
Leu
>WENV182315882
OHYC01004815
144593
Actinomycetota
TAT
Ile
>WENV182315941
OHYC01008430
144636
Actinomycetota
GAT
Ile
>WENV182315943
OHYC01008430
144636
Actinomycetota
GAT
Ile
>WENV182315578
OHYC01000199
98279
Actinomycetota
GTA
Tyr
>WENV182315601
OHYC01000260
338148
Actinomycetota
CTG
Gln
>WENV182316035
OHYC01017133
338139
Actinomycetota
GTT
Asn
>WENV182315739
OHYC01001046
411554
Actinomycetota
CCC
Gly
>WENV182315684
OHYC01000690
113601
Actinomycetota
TAG
Leu
>WENV182315731
OHYC01001030
144595
Actinomycetota
CAA
Leu
>WENV182315947
OHYC01008606
145343
Actinomycetota
GGG
Pro
>WENV182315762
OHYC01001393
235149
Actinomycetota
CCT
Arg
>WENV182315962
OHYC01009706
414234
Actinomycetota
CTG
Gln
>WENV182315658
OHYC01000550
91808
Actinomycetota
CAG
Leu
>WENV182315683
OHYC01000690
235121
Actinomycetota
CGT
Thr
>WENV182315726
OHYC01000991
393408
Actinomycetota
TTC
Glu
>WENV182315777
OHYC01001500
44851
Actinomycetota
TGA
Ser
>WENV182315815
OHYC01002645
158513
Actinomycetota
TGG
Pro
>WENV182315734
OHYC01001037
235173
Actinomycetota
GGC
Ala
>WENV182315862
OHYC01003951
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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