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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182317240
OHYE01002346
119661
Verrucomicrobiota
CAA
Leu
>WENV182317302
OHYE01003614
155256
Verrucomicrobiota
TCT
Arg
>WENV182317752
OHYE01060977
345141
Verrucomicrobiota
TTG
Gln
>WENV182317429
OHYE01008701
345133
Verrucomicrobiota
GAC
Val
>WENV182317385
OHYE01006516
82054
Verrucomicrobiota
GTA
Tyr
>WENV182317480
OHYE01012028
344844
Verrucomicrobiota
GCA
Cys
>WENV182317630
OHYE01028887
155264
Verrucomicrobiota
GGG
Pro
>WENV182317256
OHYE01002632
344845
Verrucomicrobiota
CTG
Gln
>WENV182317610
OHYE01025580
128202
Verrucomicrobiota
GTC
Asp
>WENV182317581
OHYE01021620
414625
Verrucomicrobiota
CCC
Gly
>WENV182317458
OHYE01010437
46246
Verrucomicrobiota
TGA
Ser
>WENV182317679
OHYE01039837
97755
Verrucomicrobiota
TAG
Leu
>WENV182317405
OHYE01007382
246700
Verrucomicrobiota
TTC
Glu
>WENV182317533
OHYE01016274
347038
Verrucomicrobiota
GCC
Gly
>WENV182317406
OHYE01007447
344841
Verrucomicrobiota
CAC
Val
>WENV182317396
OHYE01007018
82056
Verrucomicrobiota
TAA
Leu
>WENV182317164
OHYE01001125
345123
Verrucomicrobiota
TGT
Thr
>WENV182317454
OHYE01010263
344839
Verrucomicrobiota
GTG
His
>WENV182317384
OHYE01006416
7274
Verrucomicrobiota
CGA
Ser
>WENV182317397
OHYE01007018
246260
Verrucomicrobiota
>WENV182317556
OHYE01018844
155268
Verrucomicrobiota
CGG
Pro
>WENV182317398
OHYE01007051
82181
Verrucomicrobiota
AAG
Leu
>WENV182317503
OHYE01013684
246728
Verrucomicrobiota
GAA
Phe
>WENV182317363
OHYE01005426
7256
Verrucomicrobiota
GCT
Ser
>WENV182317532
OHYE01016102
345115
Verrucomicrobiota
CAT
Met
>WENV182317380
OHYE01006225
345124
Verrucomicrobiota
GTT
Asn
>WENV182317239
OHYE01002334
17023
Verrucomicrobiota
GGA
Ser
>WENV182317297
OHYE01003485
345142
Verrucomicrobiota
CCG
Arg
>WENV182317521
OHYE01015403
246709
Verrucomicrobiota
CAT
Met
>WENV182317504
OHYE01013684
154693
Verrucomicrobiota
TGG
Pro
>WENV182317341
OHYE01004751
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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