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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182321691
OHYM01006067
144612
Bacillota
TCT
Arg
>WENV182321462
OHYM01000048
267649
Bacillota
TAC
Val
>WENV182321543
OHYM01000988
267556
Bacillota
TAC
Val
>WENV182321614
OHYM01002670
338152
Bacillota
TTC
Glu
>WENV182321794
OHYM01019767
44854
Bacillota
TGA
Ser
>WENV182321764
OHYM01015024
144577
Bacillota
GAT
Ile
>WENV182321579
OHYM01001471
338147
Bacillota
CTC
Glu
>WENV182321746
OHYM01012438
235137
Bacillota
TGC
Ala
>WENV182321804
OHYM01021263
281701
Bacillota
TGC
Ala
>WENV182321542
OHYM01000988
144668
Bacillota
GTC
Asp
>WENV182321668
OHYM01004718
182792
Bacillota
GTC
Asp
>WENV182321696
OHYM01006402
44859
Bacillota
AAG
Leu
>WENV182321703
OHYM01006908
11034
Bacillota
GGA
Ser
>WENV182321558
OHYM01001114
235079
Bacillota
GAA
Phe
>WENV182321821
OHYM01023425
338149
Bacillota
CTC
Glu
>WENV182321750
OHYM01012698
271471
Bacillota
GCC
Gly
>WENV182321473
OHYM01000108
37269
Bacillota
TGA
Ser
>WENV182321613
OHYM01002670
287000
Bacillota
GTT
Asn
>WENV182321842
OHYM01025458
413152
Bacillota
TCC
Gly
>WENV182321756
OHYM01014158
162445
Bacillota
CAT
Met
>WENV182321439
OHYM01000001
152492
Bacillota
GGG
Pro
>WENV182321481
OHYM01000165
235078
Bacillota
TAC
Val
>WENV182321484
OHYM01000165
240017
Bacillota
GCC
Gly
>WENV182321441
OHYM01000008
147684
Bacillota
ACG
Arg
>WENV182321511
OHYM01000438
147684
Bacillota
ACG
Arg
>WENV182321795
OHYM01019767
4624
Bacillota
GCT
Ser
>WENV182321816
OHYM01021837
235095
Bacillota
GGT
Thr
>WENV182321651
OHYM01003864
235142
Bacillota
CTT
Lys
>WENV182321598
OHYM01001891
148188
Bacillota
CCG
Arg
>WENV182321704
OHYM01007048
80612
Bacillota
GTA
Tyr
>WENV182321636
OHYM01003336
345314
Bacillota
TTG
Gln
>WENV182321839
OHYM01025000
144583
Bacillota
ACG
Arg
>WENV182321667
OHYM01004718
235171
Bacillota
CCA
Trp
>WENV182321822
OHYM01023425
144621
Bacillota
GTT
Asn
>WENV182321716
OHYM01008707
58712
Bacillota
CAG
Leu
>WENV182321848
OHYM01026358
245296
Bacillota
CCC
Gly
>WENV182321445
OHYM01000015
272488
Bacillota
GAA
Phe
>WENV182321503
OHYM01000339
272488
Bacillota
GAA
Phe
>WENV182321516
OHYM01000517
272488
Bacillota
GAA
Phe
>WENV182321736
OHYM01011274
272488
Bacillota
GAA
Phe
>WENV182321567
OHYM01001273
238945
Bacillota
GCC
Gly
>WENV182321672
OHYM01004907
238945
Bacillota
GCC
Gly
>WENV182321559
OHYM01001114
249259
Bacillota
GCC
Gly
>WENV182321535
OHYM01000941
338128
Bacillota
TTC
Glu
>WENV182321771
OHYM01016022
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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