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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182323680
OHYQ01000053
158247
Bacillota
>WENV182324055
OHYQ01021878
144612
Bacillota
TCT
Arg
>WENV182324087
OHYQ01028470
235134
Bacillota
GAA
Phe
>WENV182324012
OHYQ01013100
338152
Bacillota
TTC
Glu
>WENV182324106
OHYQ01036771
238910
Bacillota
CTT
Lys
>WENV182324062
OHYQ01022837
338147
Bacillota
CTC
Glu
>WENV182323986
OHYQ01010125
37083
Bacillota
TGA
Ser
>WENV182323874
OHYQ01002502
429429
Bacillota
CCA
Trp
>WENV182323743
OHYQ01000373
235117
Bacillota
TAC
Val
>WENV182323613
OHYQ01000004
235079
Bacillota
GAA
Phe
>WENV182324068
OHYQ01024908
235087
Bacillota
TGC
Ala
>WENV182324098
OHYQ01030641
245298
Bacillota
CGG
Pro
>WENV182323967
OHYQ01007966
37269
Bacillota
TGA
Ser
>WENV182324011
OHYQ01013100
287000
Bacillota
GTT
Asn
>WENV182323942
OHYQ01005905
152492
Bacillota
GGG
Pro
>WENV182323611
OHYQ01000004
235078
Bacillota
TAC
Val
>WENV182324097
OHYQ01030641
411547
Bacillota
CTG
Gln
>WENV182324029
OHYQ01016735
147684
Bacillota
ACG
Arg
>WENV182324024
OHYQ01015494
18852
Bacillota
GCT
Ser
>WENV182324067
OHYQ01024809
185292
Bacillota
ACG
Arg
>WENV182323808
OHYQ01001320
148188
Bacillota
CCG
Arg
>WENV182323896
OHYQ01003396
298639
Bacillota
GTT
Asn
>WENV182323965
OHYQ01007918
80612
Bacillota
GTA
Tyr
>WENV182323661
OHYQ01000018
298620
Bacillota
CAT
Met
>WENV182323821
OHYQ01001579
298620
Bacillota
CAT
Met
>WENV182324015
OHYQ01013100
144652
Bacillota
GTC
Asp
>WENV182323989
OHYQ01010572
196632
Bacillota
GTC
Asp
>WENV182324025
OHYQ01015863
299139
Bacillota
TGC
Ala
>WENV182323950
OHYQ01006261
95563
Bacillota
GTA
Tyr
>WENV182323634
OHYQ01000010
338127
Bacillota
TTG
Gln
>WENV182323832
OHYQ01001743
338128
Bacillota
TTC
Glu
>WENV182323990
OHYQ01010572
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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