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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182333962
OHZL01030573
235146
Actinomycetota
CGT
Thr
>WENV182333731
OHZL01002441
119475
Actinomycetota
TAA
Leu
>WENV182333779
OHZL01003684
235347
Actinomycetota
GGC
Ala
>WENV182333636
OHZL01000672
235153
Actinomycetota
CCT
Arg
>WENV182333619
OHZL01000574
144589
Actinomycetota
ACG
Arg
>WENV182333650
OHZL01000834
37070
Actinomycetota
CGA
Ser
>WENV182333799
OHZL01004485
201717
Actinomycetota
CTT
Lys
>WENV182333895
OHZL01013772
304559
Actinomycetota
GCC
Gly
>WENV182333793
OHZL01004292
411601
Actinomycetota
CCC
Gly
>WENV182333532
OHZL01000088
23370
Actinomycetota
GCT
Ser
>WENV182333709
OHZL01001554
235174
Actinomycetota
TGC
Ala
>WENV182333850
OHZL01009050
121510
Actinomycetota
TAA
Leu
>WENV182333687
OHZL01001210
144625
Actinomycetota
GTC
Asp
>WENV182333656
OHZL01000913
235199
Actinomycetota
CAC
Val
>WENV182333805
OHZL01005200
44862
Actinomycetota
CGA
Ser
>WENV182333609
OHZL01000483
198659
Actinomycetota
TAC
Val
>WENV182333680
OHZL01001101
254857
Actinomycetota
CCG
Arg
>WENV182333617
OHZL01000546
16223
Actinomycetota
GAG
Leu
>WENV182333639
OHZL01000698
144593
Actinomycetota
TAT
Ile
>WENV182333620
OHZL01000580
144700
Actinomycetota
CAT
Met
>WENV182333742
OHZL01002643
144636
Actinomycetota
GAT
Ile
>WENV182333586
OHZL01000305
98279
Actinomycetota
GTA
Tyr
>WENV182333499
OHZL01000032
338148
Actinomycetota
CTG
Gln
>WENV182333652
OHZL01000849
235148
Actinomycetota
GTT
Asn
>WENV182333662
OHZL01000967
176456
Actinomycetota
TCT
Arg
>WENV182333833
OHZL01006972
144825
Actinomycetota
CAT
Met
>WENV182333815
OHZL01005798
235348
Actinomycetota
CCT
Arg
>WENV182333551
OHZL01000142
411554
Actinomycetota
CCC
Gly
>WENV182333734
OHZL01002527
113601
Actinomycetota
TAG
Leu
>WENV182333653
OHZL01000868
144595
Actinomycetota
CAA
Leu
>WENV182333654
OHZL01000896
235149
Actinomycetota
CCT
Arg
>WENV182333917
OHZL01016545
414234
Actinomycetota
CTG
Gln
>WENV182333550
OHZL01000142
91808
Actinomycetota
CAG
Leu
>WENV182333733
OHZL01002527
235121
Actinomycetota
CGT
Thr
>WENV182333686
OHZL01001210
393408
Actinomycetota
TTC
Glu
>WENV182333592
OHZL01000368
47164
Actinomycetota
GGA
Ser
>WENV182333822
OHZL01006015
144635
Actinomycetota
TGG
Pro
>WENV182333593
OHZL01000379
44851
Actinomycetota
TGA
Ser
>WENV182333789
OHZL01004196
158513
Actinomycetota
TGG
Pro
>WENV182333616
OHZL01000543
235173
Actinomycetota
GGC
Ala
>WENV182333961
OHZL01030131
243162
Actinomycetota
GTT
Asn
>WENV182333775
OHZL01003501
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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