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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182346747
OIAT01011846
155958
Bacillota
GAT
Ile
>WENV182346788
OIAT01015635
144612
Bacillota
TCT
Arg
>WENV182346653
OIAT01003257
235098
Bacillota
GAC
Val
>WENV182346590
OIAT01001333
338152
Bacillota
TTC
Glu
>WENV182346668
OIAT01004726
44854
Bacillota
TGA
Ser
>WENV182346587
OIAT01001300
238910
Bacillota
CTT
Lys
>WENV182346670
OIAT01004775
338147
Bacillota
CTC
Glu
>WENV182346676
OIAT01005435
155273
Bacillota
CAT
Met
>WENV182346820
OIAT01022145
235137
Bacillota
TGC
Ala
>WENV182346846
OIAT01029171
340802
Bacillota
TTG
Gln
>WENV182346646
OIAT01003057
182792
Bacillota
GTC
Asp
>WENV182346728
OIAT01009050
41154
Bacillota
TAA
Leu
>WENV182346792
OIAT01015826
44859
Bacillota
AAG
Leu
>WENV182346684
OIAT01005775
11034
Bacillota
GGA
Ser
>WENV182346835
OIAT01026438
235079
Bacillota
GAA
Phe
>WENV182346702
OIAT01006370
338149
Bacillota
CTC
Glu
>WENV182346655
OIAT01003309
245298
Bacillota
CGG
Pro
>WENV182346589
OIAT01001333
287000
Bacillota
GTT
Asn
>WENV182346534
OIAT01000570
162445
Bacillota
CAT
Met
>WENV182346491
OIAT01000206
152492
Bacillota
GGG
Pro
>WENV182346845
OIAT01029171
144610
Bacillota
GTG
His
>WENV182346654
OIAT01003309
411547
Bacillota
CTG
Gln
>WENV182346669
OIAT01004726
4624
Bacillota
GCT
Ser
>WENV182346507
OIAT01000284
412387
Bacillota
GCA
Cys
>WENV182346513
OIAT01000331
412387
Bacillota
GCA
Cys
>WENV182346647
OIAT01003057
235095
Bacillota
GGT
Thr
>WENV182346369
OIAT01000006
344183
Bacillota
CTG
Gln
>WENV182346740
OIAT01009756
411549
Bacillota
TTG
Gln
>WENV182346630
OIAT01002350
148188
Bacillota
CCG
Arg
>WENV182346678
OIAT01005523
80612
Bacillota
GTA
Tyr
>WENV182346581
OIAT01001096
163943
Bacillota
GTC
Asp
>WENV182346680
OIAT01005641
235124
Bacillota
TGG
Pro
>WENV182346793
OIAT01015869
157838
Bacillota
GTC
Asp
>WENV182346520
OIAT01000378
144583
Bacillota
ACG
Arg
>WENV182346645
OIAT01003057
235171
Bacillota
CCA
Trp
>WENV182346703
OIAT01006370
144621
Bacillota
GTT
Asn
>WENV182346727
OIAT01009001
58712
Bacillota
CAG
Leu
>WENV182346759
OIAT01012834
245296
Bacillota
CCC
Gly
>WENV182346577
OIAT01001031
272992
Bacillota
CTT
Lys
>WENV182346844
OIAT01029171
157635
Bacillota
TCT
Arg
>WENV182346648
OIAT01003106
144594
Bacillota
CAC
Val
>WENV182346563
OIAT01000937
272488
Bacillota
GAA
Phe
>WENV182346671
OIAT01004872
238945
Bacillota
GCC
Gly
>WENV182346737
OIAT01009453
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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