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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182348794
OIBA01000117
235153
Actinomycetota
CCT
Arg
>WENV182348985
OIBA01001542
245301
Actinomycetota
GCC
Gly
>WENV182349144
OIBA01012934
23370
Actinomycetota
GCT
Ser
>WENV182349171
OIBA01015775
162208
Actinomycetota
TAC
Val
>WENV182349193
OIBA01021313
235174
Actinomycetota
TGC
Ala
>WENV182349107
OIBA01008486
145423
Actinomycetota
TCT
Arg
>WENV182349007
OIBA01002113
153948
Actinomycetota
GGG
Pro
>WENV182348976
OIBA01001433
144636
Actinomycetota
GAT
Ile
>WENV182348978
OIBA01001433
144636
Actinomycetota
GAT
Ile
>WENV182349197
OIBA01022199
98279
Actinomycetota
GTA
Tyr
>WENV182349189
OIBA01020392
338148
Actinomycetota
CTG
Gln
>WENV182348938
OIBA01000820
338139
Actinomycetota
GTT
Asn
>WENV182349097
OIBA01006943
113601
Actinomycetota
TAG
Leu
>WENV182348962
OIBA01001104
414234
Actinomycetota
CTG
Gln
>WENV182349096
OIBA01006943
235121
Actinomycetota
CGT
Thr
>WENV182349157
OIBA01013693
144635
Actinomycetota
TGG
Pro
>WENV182349140
OIBA01012621
119485
Actinomycetota
TAA
Leu
>WENV182348845
OIBA01000317
158513
Actinomycetota
TGG
Pro
>WENV182349194
OIBA01021313
235173
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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