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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182349510
OIBC01001789
196621
Bacillota
GTC
Asp
>WENV182349508
OIBC01001732
144612
Bacillota
TCT
Arg
>WENV182349729
OIBC01013014
235134
Bacillota
GAA
Phe
>WENV182349339
OIBC01000204
267556
Bacillota
TAC
Val
>WENV182349410
OIBC01000533
235098
Bacillota
GAC
Val
>WENV182349495
OIBC01001568
148239
Bacillota
TCT
Arg
>WENV182349414
OIBC01000549
44854
Bacillota
TGA
Ser
>WENV182349513
OIBC01001813
37071
Bacillota
TGA
Ser
>WENV182349287
OIBC01000062
59312
Bacillota
CAG
Leu
>WENV182349679
OIBC01008859
238910
Bacillota
CTT
Lys
>WENV182349320
OIBC01000173
338147
Bacillota
CTC
Glu
>WENV182349602
OIBC01004135
422863
Bacillota
GCA
Cys
>WENV182349497
OIBC01001568
340802
Bacillota
TTG
Gln
>WENV182349617
OIBC01004542
235114
Bacillota
TTT
Lys
>WENV182349570
OIBC01003450
429429
Bacillota
CCA
Trp
>WENV182349285
OIBC01000062
44859
Bacillota
AAG
Leu
>WENV182349286
OIBC01000062
44859
Bacillota
AAG
Leu
>WENV182349433
OIBC01000682
11034
Bacillota
GGA
Ser
>WENV182349529
OIBC01002215
11034
Bacillota
GGA
Ser
>WENV182349597
OIBC01004135
238151
Bacillota
>WENV182349393
OIBC01000455
274189
Bacillota
TGT
Thr
>WENV182349420
OIBC01000578
295714
Bacillota
GCC
Gly
>WENV182349315
OIBC01000146
338149
Bacillota
CTC
Glu
>WENV182349292
OIBC01000065
245298
Bacillota
CGG
Pro
>WENV182349301
OIBC01000096
37269
Bacillota
TGA
Ser
>WENV182349358
OIBC01000261
169968
Bacillota
CAT
Met
>WENV182349600
OIBC01004135
237266
Bacillota
GTG
His
>WENV182349496
OIBC01001568
144610
Bacillota
GTG
His
>WENV182349730
OIBC01013014
240017
Bacillota
GCC
Gly
>WENV182349280
OIBC01000054
411547
Bacillota
CTG
Gln
>WENV182349291
OIBC01000065
411547
Bacillota
CTG
Gln
>WENV182349415
OIBC01000549
4624
Bacillota
GCT
Ser
>WENV182349448
OIBC01000747
235095
Bacillota
GGT
Thr
>WENV182349511
OIBC01001789
235095
Bacillota
GGT
Thr
>WENV182349422
OIBC01000581
241471
Bacillota
TGC
Ala
>WENV182349714
OIBC01011633
185292
Bacillota
ACG
Arg
>WENV182349528
OIBC01002208
411549
Bacillota
TTG
Gln
>WENV182349371
OIBC01000323
235142
Bacillota
CTT
Lys
>WENV182349598
OIBC01004135
85288
Bacillota
GTA
Tyr
>WENV182349389
OIBC01000428
148188
Bacillota
CCG
Arg
>WENV182349476
OIBC01001194
148188
Bacillota
CCG
Arg
>WENV182349658
OIBC01006811
163943
Bacillota
GTC
Asp
>WENV182349541
OIBC01002546
235124
Bacillota
TGG
Pro
>WENV182349532
OIBC01002237
338129
Bacillota
TGT
Thr
>WENV182349596
OIBC01004135
279755
Bacillota
GTC
Asp
>WENV182349426
OIBC01000635
144583
Bacillota
ACG
Arg
>WENV182349732
OIBC01013163
247734
Bacillota
TGC
Ala
>WENV182349629
OIBC01005145
238974
Bacillota
GAA
Phe
>WENV182349316
OIBC01000146
144621
Bacillota
GTT
Asn
>WENV182349616
OIBC01004542
235113
Bacillota
GAA
Phe
>WENV182349594
OIBC01004135
6950
Bacillota
TGA
Ser
>WENV182349323
OIBC01000179
58712
Bacillota
CAG
Leu
>WENV182349503
OIBC01001692
58712
Bacillota
CAG
Leu
>WENV182349373
OIBC01000341
245296
Bacillota
CCC
Gly
>WENV182349424
OIBC01000625
245296
Bacillota
CCC
Gly
>WENV182349502
OIBC01001673
272992
Bacillota
CTT
Lys
>WENV182349614
OIBC01004452
415519
Bacillota
GCA
Cys
>WENV182349805
OIBC01029893
198135
Bacillota
GAT
Ile
>WENV182349388
OIBC01000421
178024
Bacillota
TCT
Arg
>WENV182349326
OIBC01000196
144594
Bacillota
CAC
Val
>WENV182349567
OIBC01003410
144594
Bacillota
CAC
Val
>WENV182349390
OIBC01000432
95563
Bacillota
GTA
Tyr
>WENV182349599
OIBC01004135
412118
Bacillota
>WENV182349603
OIBC01004135
45160
Bacillota
CAA
Leu
>WENV182349370
OIBC01000302
338128
Bacillota
TTC
Glu
>WENV182349758
OIBC01017812
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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