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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182353408
OIBL01003740
119661
Verrucomicrobiota
CAA
Leu
>WENV182353291
OIBL01001518
155256
Verrucomicrobiota
TCT
Arg
>WENV182353180
OIBL01000774
246701
Verrucomicrobiota
TTT
Lys
>WENV182353370
OIBL01002698
345141
Verrucomicrobiota
TTG
Gln
>WENV182353372
OIBL01002738
345133
Verrucomicrobiota
GAC
Val
>WENV182353188
OIBL01000828
82054
Verrucomicrobiota
GTA
Tyr
>WENV182353332
OIBL01002146
246677
Verrucomicrobiota
CTT
Lys
>WENV182353115
OIBL01000457
344844
Verrucomicrobiota
GCA
Cys
>WENV182353194
OIBL01000872
155264
Verrucomicrobiota
GGG
Pro
>WENV182353515
OIBL01007572
344845
Verrucomicrobiota
CTG
Gln
>WENV182353203
OIBL01000963
128202
Verrucomicrobiota
GTC
Asp
>WENV182353296
OIBL01001544
414625
Verrucomicrobiota
CCC
Gly
>WENV182353337
OIBL01002220
46246
Verrucomicrobiota
TGA
Ser
>WENV182353259
OIBL01001221
97755
Verrucomicrobiota
TAG
Leu
>WENV182353327
OIBL01002016
246700
Verrucomicrobiota
TTC
Glu
>WENV182353453
OIBL01005199
347038
Verrucomicrobiota
GCC
Gly
>WENV182353214
OIBL01001014
246687
Verrucomicrobiota
CGC
Ala
>WENV182353430
OIBL01004603
344841
Verrucomicrobiota
CAC
Val
>WENV182353335
OIBL01002168
60880
Verrucomicrobiota
CAG
Leu
>WENV182353271
OIBL01001336
82056
Verrucomicrobiota
TAA
Leu
>WENV182353331
OIBL01002146
344842
Verrucomicrobiota
CGT
Thr
>WENV182353145
OIBL01000553
345123
Verrucomicrobiota
TGT
Thr
>WENV182353371
OIBL01002700
345110
Verrucomicrobiota
CCT
Arg
>WENV182353333
OIBL01002156
344839
Verrucomicrobiota
GTG
His
>WENV182353589
OIBL01013073
7274
Verrucomicrobiota
CGA
Ser
>WENV182353272
OIBL01001336
246260
Verrucomicrobiota
>WENV182353514
OIBL01007516
155268
Verrucomicrobiota
CGG
Pro
>WENV182353099
OIBL01000357
246728
Verrucomicrobiota
GAA
Phe
>WENV182353411
OIBL01003894
7256
Verrucomicrobiota
GCT
Ser
>WENV182353255
OIBL01001192
345115
Verrucomicrobiota
CAT
Met
>WENV182353315
OIBL01001827
345119
Verrucomicrobiota
TAC
Val
>WENV182353336
OIBL01002174
345124
Verrucomicrobiota
GTT
Asn
>WENV182353467
OIBL01005428
17023
Verrucomicrobiota
GGA
Ser
>WENV182353373
OIBL01002746
345142
Verrucomicrobiota
CCG
Arg
>WENV182353334
OIBL01002156
246709
Verrucomicrobiota
CAT
Met
>WENV182353100
OIBL01000357
154693
Verrucomicrobiota
TGG
Pro
>WENV182353339
OIBL01002225
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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