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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182356102
OIBQ01008506
309417
Bacillota
GGC
Ala
>WENV182355836
OIBQ01000207
158247
Bacillota
>WENV182355896
OIBQ01000504
144612
Bacillota
TCT
Arg
>WENV182355922
OIBQ01000699
267649
Bacillota
TAC
Val
>WENV182356054
OIBQ01005196
44854
Bacillota
TGA
Ser
>WENV182356115
OIBQ01010785
144577
Bacillota
GAT
Ile
>WENV182355737
OIBQ01000012
304022
Bacillota
GCC
Gly
>WENV182355841
OIBQ01000251
304022
Bacillota
GCC
Gly
>WENV182355768
OIBQ01000044
59312
Bacillota
CAG
Leu
>WENV182355749
OIBQ01000019
338147
Bacillota
CTC
Glu
>WENV182355819
OIBQ01000149
338147
Bacillota
CTC
Glu
>WENV182355946
OIBQ01001014
340802
Bacillota
TTG
Gln
>WENV182356187
OIBQ01024098
281701
Bacillota
TGC
Ala
>WENV182355759
OIBQ01000028
235114
Bacillota
TTT
Lys
>WENV182356005
OIBQ01002896
429429
Bacillota
CCA
Trp
>WENV182356076
OIBQ01006432
313454
Bacillota
GAA
Phe
>WENV182355746
OIBQ01000017
44859
Bacillota
AAG
Leu
>WENV182356156
OIBQ01016568
11034
Bacillota
GGA
Ser
>WENV182355736
OIBQ01000012
235079
Bacillota
GAA
Phe
>WENV182356114
OIBQ01010785
235087
Bacillota
TGC
Ala
>WENV182356057
OIBQ01005205
316443
Bacillota
GTC
Asp
>WENV182356123
OIBQ01011885
245298
Bacillota
CGG
Pro
>WENV182355793
OIBQ01000078
37269
Bacillota
TGA
Ser
>WENV182356181
OIBQ01022170
287000
Bacillota
GTT
Asn
>WENV182356182
OIBQ01022561
169968
Bacillota
CAT
Met
>WENV182355858
OIBQ01000293
162445
Bacillota
CAT
Met
>WENV182355741
OIBQ01000014
152492
Bacillota
GGG
Pro
>WENV182355853
OIBQ01000291
235078
Bacillota
TAC
Val
>WENV182355945
OIBQ01001014
144610
Bacillota
GTG
His
>WENV182355856
OIBQ01000291
240017
Bacillota
GCC
Gly
>WENV182356122
OIBQ01011885
411547
Bacillota
CTG
Gln
>WENV182355779
OIBQ01000068
147684
Bacillota
ACG
Arg
>WENV182356006
OIBQ01002955
147684
Bacillota
ACG
Arg
>WENV182356055
OIBQ01005196
4624
Bacillota
GCT
Ser
>WENV182356059
OIBQ01005205
109476
Bacillota
TAG
Leu
>WENV182356064
OIBQ01005364
235095
Bacillota
GGT
Thr
>WENV182356131
OIBQ01012856
239832
Bacillota
TGT
Thr
>WENV182355837
OIBQ01000210
235142
Bacillota
CTT
Lys
>WENV182355932
OIBQ01000827
235142
Bacillota
CTT
Lys
>WENV182355844
OIBQ01000257
148188
Bacillota
CCG
Arg
>WENV182355889
OIBQ01000484
148188
Bacillota
CCG
Arg
>WENV182355974
OIBQ01001783
298639
Bacillota
GTT
Asn
>WENV182355997
OIBQ01002576
298620
Bacillota
CAT
Met
>WENV182356108
OIBQ01009686
235124
Bacillota
TGG
Pro
>WENV182355758
OIBQ01000028
235113
Bacillota
GAA
Phe
>WENV182356037
OIBQ01004258
58712
Bacillota
CAG
Leu
>WENV182356125
OIBQ01012388
245296
Bacillota
CCC
Gly
>WENV182355944
OIBQ01001014
157635
Bacillota
TCT
Arg
>WENV182355994
OIBQ01002453
299139
Bacillota
TGC
Ala
>WENV182355817
OIBQ01000143
95563
Bacillota
GTA
Tyr
>WENV182355873
OIBQ01000405
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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