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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182361103
OICC01000569
119475
Actinomycetota
TAA
Leu
>WENV182361150
OICC01001479
235153
Actinomycetota
CCT
Arg
>WENV182361152
OICC01001529
144589
Actinomycetota
ACG
Arg
>WENV182361015
OICC01000076
37070
Actinomycetota
CGA
Ser
>WENV182361079
OICC01000357
235092
Actinomycetota
CCG
Arg
>WENV182361120
OICC01000737
16219
Actinomycetota
GCT
Ser
>WENV182361077
OICC01000344
235174
Actinomycetota
TGC
Ala
>WENV182361028
OICC01000104
235101
Actinomycetota
TTT
Lys
>WENV182361081
OICC01000375
144625
Actinomycetota
GTC
Asp
>WENV182361196
OICC01003109
153948
Actinomycetota
GGG
Pro
>WENV182361064
OICC01000289
198659
Actinomycetota
TAC
Val
>WENV182361098
OICC01000477
16223
Actinomycetota
GAG
Leu
>WENV182361073
OICC01000320
144593
Actinomycetota
TAT
Ile
>WENV182361096
OICC01000454
295695
Actinomycetota
CTC
Glu
>WENV182361031
OICC01000130
98279
Actinomycetota
GTA
Tyr
>WENV182361097
OICC01000454
338148
Actinomycetota
CTG
Gln
>WENV182361195
OICC01003093
235148
Actinomycetota
GTT
Asn
>WENV182361136
OICC01001042
176456
Actinomycetota
TCT
Arg
>WENV182361142
OICC01001203
411554
Actinomycetota
CCC
Gly
>WENV182361115
OICC01000675
113601
Actinomycetota
TAG
Leu
>WENV182361065
OICC01000299
144595
Actinomycetota
CAA
Leu
>WENV182361124
OICC01000800
145343
Actinomycetota
GGG
Pro
>WENV182361012
OICC01000070
235149
Actinomycetota
CCT
Arg
>WENV182361345
OICC01022601
414234
Actinomycetota
CTG
Gln
>WENV182361114
OICC01000675
235121
Actinomycetota
CGT
Thr
>WENV182361066
OICC01000299
144635
Actinomycetota
TGG
Pro
>WENV182361002
OICC01000053
80622
Actinomycetota
CAG
Leu
>WENV182361048
OICC01000235
44851
Actinomycetota
TGA
Ser
>WENV182361078
OICC01000344
235173
Actinomycetota
GGC
Ala
>WENV182361126
OICC01000806
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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