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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182361651
OICD01000399
95987
Bacteroidota
CAA
Leu
>WENV182361479
OICD01000103
339412
Bacteroidota
GGT
Thr
>WENV182361475
OICD01000101
413663
Bacteroidota
CTG
Gln
>WENV182361476
OICD01000101
413663
Bacteroidota
CTG
Gln
>WENV182361659
OICD01000433
136244
Bacteroidota
TAC
Val
>WENV182361746
OICD01000842
136244
Bacteroidota
TAC
Val
>WENV182361480
OICD01000103
237797
Bacteroidota
CCA
Trp
>WENV182361449
OICD01000057
412479
Bacteroidota
TTG
Gln
>WENV182361467
OICD01000089
147147
Bacteroidota
GTG
His
>WENV182361468
OICD01000089
147147
Bacteroidota
GTG
His
>WENV182361769
OICD01000969
37076
Bacteroidota
TAA
Leu
>WENV182361676
OICD01000487
344769
Bacteroidota
CTC
Glu
>WENV182361678
OICD01000487
344769
Bacteroidota
CTC
Glu
>WENV182362116
OICD01006204
353927
Bacteroidota
TTC
Glu
>WENV182361963
OICD01002706
414426
Bacteroidota
CTG
Gln
>WENV182362012
OICD01003712
151960
Bacteroidota
GGC
Ala
>WENV182362458
OICD01034030
16220
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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