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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182363520
OICF01025953
119475
Actinomycetota
TAA
Leu
>WENV182363476
OICF01016086
37070
Actinomycetota
CGA
Ser
>WENV182363412
OICF01007730
235092
Actinomycetota
CCG
Arg
>WENV182363449
OICF01011350
16219
Actinomycetota
GCT
Ser
>WENV182363303
OICF01001503
235174
Actinomycetota
TGC
Ala
>WENV182363282
OICF01001097
235101
Actinomycetota
TTT
Lys
>WENV182363334
OICF01002675
144625
Actinomycetota
GTC
Asp
>WENV182363345
OICF01003152
144593
Actinomycetota
TAT
Ile
>WENV182363447
OICF01010779
144700
Actinomycetota
CAT
Met
>WENV182363508
OICF01021966
144636
Actinomycetota
GAT
Ile
>WENV182363339
OICF01002813
338148
Actinomycetota
CTG
Gln
>WENV182363432
OICF01009222
113601
Actinomycetota
TAG
Leu
>WENV182363518
OICF01025706
235149
Actinomycetota
CCT
Arg
>WENV182363433
OICF01009402
153915
Actinomycetota
ACG
Arg
>WENV182363431
OICF01009222
235121
Actinomycetota
CGT
Thr
>WENV182363473
OICF01014685
144635
Actinomycetota
TGG
Pro
>WENV182363448
OICF01011325
61501
Actinomycetota
CAG
Leu
>WENV182363336
OICF01002749
80622
Actinomycetota
CAG
Leu
>WENV182363481
OICF01016607
44851
Actinomycetota
TGA
Ser
>WENV182363304
OICF01001503
235173
Actinomycetota
GGC
Ala
>WENV182363446
OICF01010779
95593
Actinomycetota
>WENV182363499
OICF01020018
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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