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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182379433
OIDM01000134
235153
Actinomycetota
CCT
Arg
>WENV182379731
OIDM01011012
144589
Actinomycetota
ACG
Arg
>WENV182379746
OIDM01013594
37070
Actinomycetota
CGA
Ser
>WENV182379619
OIDM01003578
245301
Actinomycetota
GCC
Gly
>WENV182379785
OIDM01023031
235174
Actinomycetota
TGC
Ala
>WENV182379485
OIDM01000398
153948
Actinomycetota
GGG
Pro
>WENV182379741
OIDM01013100
144593
Actinomycetota
TAT
Ile
>WENV182379574
OIDM01001730
144636
Actinomycetota
GAT
Ile
>WENV182379722
OIDM01010176
98279
Actinomycetota
GTA
Tyr
>WENV182379650
OIDM01004889
176456
Actinomycetota
TCT
Arg
>WENV182379556
OIDM01001225
338139
Actinomycetota
GTT
Asn
>WENV182379695
OIDM01008200
113601
Actinomycetota
TAG
Leu
>WENV182379804
OIDM01028831
144595
Actinomycetota
CAA
Leu
>WENV182379568
OIDM01001523
414234
Actinomycetota
CTG
Gln
>WENV182379694
OIDM01008200
235121
Actinomycetota
CGT
Thr
>WENV182379550
OIDM01001125
61501
Actinomycetota
CAG
Leu
>WENV182379624
OIDM01003769
44851
Actinomycetota
TGA
Ser
>WENV182379483
OIDM01000374
158513
Actinomycetota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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