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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182380475
OIDP01000270
196621
Bacillota
GTC
Asp
>WENV182380747
OIDP01004579
155958
Bacillota
GAT
Ile
>WENV182380561
OIDP01000856
202812
Bacillota
CAT
Met
>WENV182380548
OIDP01000698
144612
Bacillota
TCT
Arg
>WENV182380710
OIDP01003382
144612
Bacillota
TCT
Arg
>WENV182380578
OIDP01001061
235134
Bacillota
GAA
Phe
>WENV182380308
OIDP01000016
339890
Bacillota
TTG
Gln
>WENV182380471
OIDP01000262
235098
Bacillota
GAC
Val
>WENV182380551
OIDP01000724
44854
Bacillota
TGA
Ser
>WENV182380895
OIDP01016453
44854
Bacillota
TGA
Ser
>WENV182380964
OIDP01027904
246023
Bacillota
TGC
Ala
>WENV182380636
OIDP01001792
59312
Bacillota
CAG
Leu
>WENV182380743
OIDP01004464
238910
Bacillota
CTT
Lys
>WENV182380776
OIDP01006336
245370
Bacillota
TGT
Thr
>WENV182380361
OIDP01000053
338147
Bacillota
CTC
Glu
>WENV182380406
OIDP01000111
338147
Bacillota
CTC
Glu
>WENV182380531
OIDP01000572
338147
Bacillota
CTC
Glu
>WENV182380465
OIDP01000252
235114
Bacillota
TTT
Lys
>WENV182380507
OIDP01000409
235114
Bacillota
TTT
Lys
>WENV182380510
OIDP01000434
198770
Bacillota
GTC
Asp
>WENV182380666
OIDP01002394
44859
Bacillota
AAG
Leu
>WENV182380553
OIDP01000731
11034
Bacillota
GGA
Ser
>WENV182380292
OIDP01000009
235079
Bacillota
GAA
Phe
>WENV182380546
OIDP01000668
147232
Bacillota
GTC
Asp
>WENV182380905
OIDP01017355
238677
Bacillota
AGT
Thr
>WENV182380389
OIDP01000082
338149
Bacillota
CTC
Glu
>WENV182380613
OIDP01001410
245298
Bacillota
CGG
Pro
>WENV182380495
OIDP01000363
37269
Bacillota
TGA
Ser
>WENV182380936
OIDP01021697
37269
Bacillota
TGA
Ser
>WENV182380700
OIDP01003072
287000
Bacillota
GTT
Asn
>WENV182380315
OIDP01000016
169968
Bacillota
CAT
Met
>WENV182380881
OIDP01013638
413152
Bacillota
TCC
Gly
>WENV182380821
OIDP01009044
152492
Bacillota
GGG
Pro
>WENV182380290
OIDP01000009
235078
Bacillota
TAC
Val
>WENV182380611
OIDP01001408
100326
Bacillota
GTA
Tyr
>WENV182380463
OIDP01000252
144610
Bacillota
GTG
His
>WENV182380579
OIDP01001061
240017
Bacillota
GCC
Gly
>WENV182380392
OIDP01000086
411547
Bacillota
CTG
Gln
>WENV182380612
OIDP01001410
411547
Bacillota
CTG
Gln
>WENV182380698
OIDP01002947
147684
Bacillota
ACG
Arg
>WENV182380552
OIDP01000724
4624
Bacillota
GCT
Ser
>WENV182380473
OIDP01000270
235095
Bacillota
GGT
Thr
>WENV182380476
OIDP01000270
235095
Bacillota
GGT
Thr
>WENV182380730
OIDP01003852
419945
Bacillota
GCA
Cys
>WENV182380372
OIDP01000062
411549
Bacillota
TTG
Gln
>WENV182380438
OIDP01000178
235142
Bacillota
CTT
Lys
>WENV182380560
OIDP01000852
235142
Bacillota
CTT
Lys
>WENV182380441
OIDP01000180
148188
Bacillota
CCG
Arg
>WENV182380444
OIDP01000184
148188
Bacillota
CCG
Arg
>WENV182380482
OIDP01000300
80612
Bacillota
GTA
Tyr
>WENV182380439
OIDP01000179
256380
Bacillota
>WENV182380488
OIDP01000319
298620
Bacillota
CAT
Met
>WENV182380568
OIDP01000941
235124
Bacillota
TGG
Pro
>WENV182380357
OIDP01000051
157838
Bacillota
GTC
Asp
>WENV182380480
OIDP01000290
157838
Bacillota
GTC
Asp
>WENV182380418
OIDP01000127
144583
Bacillota
ACG
Arg
>WENV182380585
OIDP01001169
144652
Bacillota
GTC
Asp
>WENV182380756
OIDP01004959
247734
Bacillota
TGC
Ala
>WENV182380588
OIDP01001169
238974
Bacillota
GAA
Phe
>WENV182380390
OIDP01000082
144621
Bacillota
GTT
Asn
>WENV182380445
OIDP01000189
235113
Bacillota
GAA
Phe
>WENV182380506
OIDP01000409
235113
Bacillota
GAA
Phe
>WENV182380487
OIDP01000318
277200
Bacillota
GGC
Ala
>WENV182380779
OIDP01006336
243098
Bacillota
GGT
Thr
>WENV182380368
OIDP01000060
58712
Bacillota
CAG
Leu
>WENV182380412
OIDP01000117
58712
Bacillota
CAG
Leu
>WENV182380494
OIDP01000342
245296
Bacillota
CCC
Gly
>WENV182380780
OIDP01006378
272992
Bacillota
CTT
Lys
>WENV182380688
OIDP01002865
344240
Bacillota
GCC
Gly
>WENV182380771
OIDP01005814
248965
Bacillota
GCC
Gly
>WENV182380687
OIDP01002844
178024
Bacillota
TCT
Arg
>WENV182380884
OIDP01014393
299139
Bacillota
TGC
Ala
>WENV182380532
OIDP01000587
144594
Bacillota
CAC
Val
>WENV182380360
OIDP01000053
95563
Bacillota
GTA
Tyr
>WENV182380504
OIDP01000409
95563
Bacillota
GTA
Tyr
>WENV182380342
OIDP01000034
338127
Bacillota
TTG
Gln
>WENV182380952
OIDP01025506
414486
Bacillota
CCC
Gly
>WENV182380961
OIDP01027438
272488
Bacillota
GAA
Phe
>WENV182380540
OIDP01000628
338128
Bacillota
TTC
Glu
>WENV182380562
OIDP01000856
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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