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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182386181
OIDX01022733
144589
Actinomycetota
ACG
Arg
>WENV182386109
OIDX01010526
37070
Actinomycetota
CGA
Ser
>WENV182386115
OIDX01011192
235092
Actinomycetota
CCG
Arg
>WENV182386143
OIDX01015707
16219
Actinomycetota
GCT
Ser
>WENV182386102
OIDX01009721
235174
Actinomycetota
TGC
Ala
>WENV182386015
OIDX01002606
235101
Actinomycetota
TTT
Lys
>WENV182386135
OIDX01013661
153948
Actinomycetota
GGG
Pro
>WENV182386050
OIDX01005459
198659
Actinomycetota
TAC
Val
>WENV182386124
OIDX01012372
243671
Actinomycetota
CTC
Glu
>WENV182386097
OIDX01009493
98279
Actinomycetota
GTA
Tyr
>WENV182386125
OIDX01012372
338148
Actinomycetota
CTG
Gln
>WENV182386118
OIDX01011442
176456
Actinomycetota
TCT
Arg
>WENV182386166
OIDX01020082
113601
Actinomycetota
TAG
Leu
>WENV182386096
OIDX01009387
91808
Actinomycetota
CAG
Leu
>WENV182386165
OIDX01020082
235121
Actinomycetota
CGT
Thr
>WENV182386150
OIDX01016966
144635
Actinomycetota
TGG
Pro
>WENV182386140
OIDX01015428
238470
Actinomycetota
GTT
Asn
>WENV182386084
OIDX01008262
44851
Actinomycetota
TGA
Ser
>WENV182386132
OIDX01013218
235173
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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