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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182396254
OIEL01036269
158247
Bacillota
>WENV182395508
OIEL01001045
144612
Bacillota
TCT
Arg
>WENV182395706
OIEL01003746
144612
Bacillota
TCT
Arg
>WENV182395192
OIEL01000002
235134
Bacillota
GAA
Phe
>WENV182395328
OIEL01000103
267556
Bacillota
TAC
Val
>WENV182395419
OIEL01000362
267556
Bacillota
TAC
Val
>WENV182395990
OIEL01012711
156189
Bacillota
GAT
Ile
>WENV182395527
OIEL01001193
235098
Bacillota
GAC
Val
>WENV182396134
OIEL01022328
235098
Bacillota
GAC
Val
>WENV182395597
OIEL01001836
338152
Bacillota
TTC
Glu
>WENV182395929
OIEL01010070
44854
Bacillota
TGA
Ser
>WENV182395275
OIEL01000058
37071
Bacillota
TGA
Ser
>WENV182395349
OIEL01000124
59312
Bacillota
CAG
Leu
>WENV182395361
OIEL01000165
338147
Bacillota
CTC
Glu
>WENV182395369
OIEL01000188
338147
Bacillota
CTC
Glu
>WENV182395532
OIEL01001244
338147
Bacillota
CTC
Glu
>WENV182395956
OIEL01011780
235150
Bacillota
TGC
Ala
>WENV182396003
OIEL01013590
235294
Bacillota
TGC
Ala
>WENV182395612
OIEL01001980
340802
Bacillota
TTG
Gln
>WENV182395537
OIEL01001255
235114
Bacillota
TTT
Lys
>WENV182395909
OIEL01009086
182792
Bacillota
GTC
Asp
>WENV182395347
OIEL01000124
44859
Bacillota
AAG
Leu
>WENV182395348
OIEL01000124
44859
Bacillota
AAG
Leu
>WENV182395921
OIEL01009679
268272
Bacillota
TGC
Ala
>WENV182395726
OIEL01004239
11034
Bacillota
GGA
Ser
>WENV182396000
OIEL01013444
247057
Bacillota
TGC
Ala
>WENV182395484
OIEL01000795
274189
Bacillota
TGT
Thr
>WENV182396138
OIEL01022550
274189
Bacillota
TGT
Thr
>WENV182395381
OIEL01000228
235079
Bacillota
GAA
Phe
>WENV182396309
OIEL01044182
16266
Bacillota
GCT
Ser
>WENV182396122
OIEL01021370
173314
Bacillota
GAT
Ile
>WENV182395644
OIEL01002531
338149
Bacillota
CTC
Glu
>WENV182395312
OIEL01000082
271471
Bacillota
GCC
Gly
>WENV182395687
OIEL01003242
245298
Bacillota
CGG
Pro
>WENV182395206
OIEL01000006
37269
Bacillota
TGA
Ser
>WENV182395271
OIEL01000057
169968
Bacillota
CAT
Met
>WENV182395771
OIEL01005184
173810
Bacillota
CAT
Met
>WENV182396115
OIEL01020899
162445
Bacillota
CAT
Met
>WENV182396375
OIEL01057384
152492
Bacillota
GGG
Pro
>WENV182395193
OIEL01000002
240017
Bacillota
GCC
Gly
>WENV182395643
OIEL01002464
411547
Bacillota
CTG
Gln
>WENV182395686
OIEL01003242
411547
Bacillota
CTG
Gln
>WENV182396050
OIEL01016281
147684
Bacillota
ACG
Arg
>WENV182395930
OIEL01010070
4624
Bacillota
GCT
Ser
>WENV182395190
OIEL01000002
263765
Bacillota
TAC
Val
>WENV182395310
OIEL01000082
263765
Bacillota
TAC
Val
>WENV182395672
OIEL01003021
235095
Bacillota
GGT
Thr
>WENV182395910
OIEL01009086
235095
Bacillota
GGT
Thr
>WENV182396232
OIEL01032169
185292
Bacillota
ACG
Arg
>WENV182395742
OIEL01004390
411549
Bacillota
TTG
Gln
>WENV182395342
OIEL01000123
235142
Bacillota
CTT
Lys
>WENV182395389
OIEL01000247
235142
Bacillota
CTT
Lys
>WENV182395602
OIEL01001846
245386
Bacillota
CCA
Trp
>WENV182395800
OIEL01006009
148188
Bacillota
CCG
Arg
>WENV182395786
OIEL01005692
148188
Bacillota
CCG
Arg
>WENV182395691
OIEL01003376
256380
Bacillota
>WENV182395664
OIEL01002835
163943
Bacillota
GTC
Asp
>WENV182395462
OIEL01000640
235124
Bacillota
TGG
Pro
>WENV182395892
OIEL01008661
338129
Bacillota
TGT
Thr
>WENV182395775
OIEL01005274
144583
Bacillota
ACG
Arg
>WENV182395871
OIEL01008046
247734
Bacillota
TGC
Ala
>WENV182395908
OIEL01009086
235171
Bacillota
CCA
Trp
>WENV182396401
OIEL01064894
235171
Bacillota
CCA
Trp
>WENV182395764
OIEL01005000
238974
Bacillota
GAA
Phe
>WENV182395584
OIEL01001683
144621
Bacillota
GTT
Asn
>WENV182395645
OIEL01002531
144621
Bacillota
GTT
Asn
>WENV182395276
OIEL01000058
235113
Bacillota
GAA
Phe
>WENV182395536
OIEL01001255
235113
Bacillota
GAA
Phe
>WENV182395639
OIEL01002430
58712
Bacillota
CAG
Leu
>WENV182395815
OIEL01006367
58712
Bacillota
CAG
Leu
>WENV182395675
OIEL01003066
245296
Bacillota
CCC
Gly
>WENV182395913
OIEL01009267
272992
Bacillota
CTT
Lys
>WENV182395891
OIEL01008647
344240
Bacillota
GCC
Gly
>WENV182395880
OIEL01008232
144594
Bacillota
CAC
Val
>WENV182395353
OIEL01000145
95563
Bacillota
GTA
Tyr
>WENV182395632
OIEL01002264
272488
Bacillota
GAA
Phe
>WENV182395635
OIEL01002355
272488
Bacillota
GAA
Phe
>WENV182396096
OIEL01019504
114075
Bacillota
TAG
Leu
>WENV182396033
OIEL01015579
238945
Bacillota
GCC
Gly
>WENV182395753
OIEL01004657
273862
Bacillota
TGC
Ala
>WENV182395424
OIEL01000409
338128
Bacillota
TTC
Glu
>WENV182395652
OIEL01002658
338128
Bacillota
TTC
Glu
>WENV182396267
OIEL01037921
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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