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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182400717
OIER01000005
235097
Bacteroidota
TTT
Lys
>WENV182400772
OIER01000022
235097
Bacteroidota
TTT
Lys
>WENV182401660
OIER01005350
235097
Bacteroidota
TTT
Lys
>WENV182400708
OIER01000002
235102
Bacteroidota
CGT
Thr
>WENV182401083
OIER01000263
144657
Bacteroidota
CGG
Pro
>WENV182400755
OIER01000016
339341
Bacteroidota
GGT
Thr
>WENV182400731
OIER01000008
343138
Bacteroidota
CCT
Arg
>WENV182400899
OIER01000090
58715
Bacteroidota
GAG
Leu
>WENV182401453
OIER01001976
46165
Bacteroidota
TGA
Ser
>WENV182400839
OIER01000053
338486
Bacteroidota
CAT
Met
>WENV182401226
OIER01000615
338486
Bacteroidota
CAT
Met
>WENV182400898
OIER01000090
59689
Bacteroidota
CAG
Leu
>WENV182400920
OIER01000105
59689
Bacteroidota
CAG
Leu
>WENV182400939
OIER01000120
436206
Bacteroidota
TTG
Gln
>WENV182401521
OIER01002691
436206
Bacteroidota
TTG
Gln
>WENV182400866
OIER01000073
20893
Bacteroidota
GGA
Ser
>WENV182400916
OIER01000105
20893
Bacteroidota
GGA
Ser
>WENV182400707
OIER01000002
338124
Bacteroidota
CCG
Arg
>WENV182400942
OIER01000125
235203
Bacteroidota
TTT
Lys
>WENV182401004
OIER01000172
235203
Bacteroidota
TTT
Lys
>WENV182401454
OIER01001976
238121
Bacteroidota
CTT
Lys
>WENV182401455
OIER01001976
238121
Bacteroidota
CTT
Lys
>WENV182400719
OIER01000005
338132
Bacteroidota
GCA
Cys
>WENV182401188
OIER01000441
338132
Bacteroidota
GCA
Cys
>WENV182401523
OIER01002705
338132
Bacteroidota
GCA
Cys
>WENV182401456
OIER01001976
45423
Bacteroidota
TGA
Ser
>WENV182401026
OIER01000191
193809
Bacteroidota
CAT
Met
>WENV182400847
OIER01000064
58714
Bacteroidota
CAA
Leu
>WENV182400724
OIER01000007
301449
Bacteroidota
CGG
Pro
>WENV182400762
OIER01000018
144656
Bacteroidota
GTG
His
>WENV182400967
OIER01000139
235207
Bacteroidota
CAT
Met
>WENV182400795
OIER01000031
143169
Bacteroidota
GGG
Pro
>WENV182400825
OIER01000040
144659
Bacteroidota
GTG
His
>WENV182400826
OIER01000040
144659
Bacteroidota
GTG
His
>WENV182400756
OIER01000016
235180
Bacteroidota
CCA
Trp
>WENV182401084
OIER01000263
235180
Bacteroidota
CCA
Trp
>WENV182400726
OIER01000007
80607
Bacteroidota
GTA
Tyr
>WENV182400757
OIER01000017
80607
Bacteroidota
GTA
Tyr
>WENV182400834
OIER01000051
113604
Bacteroidota
>WENV182400837
OIER01000051
113604
Bacteroidota
>WENV182400754
OIER01000016
80614
Bacteroidota
>WENV182400827
OIER01000040
80614
Bacteroidota
>WENV182400864
OIER01000071
80614
Bacteroidota
>WENV182400818
OIER01000038
144590
Bacteroidota
GTT
Asn
>WENV182400819
OIER01000038
144590
Bacteroidota
GTT
Asn
>WENV182400940
OIER01000122
95559
Bacteroidota
TAG
Leu
>WENV182400804
OIER01000034
144655
Bacteroidota
GGC
Ala
>WENV182400732
OIER01000008
338164
Bacteroidota
TTC
Glu
>WENV182400733
OIER01000008
338164
Bacteroidota
TTC
Glu
>WENV182400848
OIER01000064
95875
Bacteroidota
TAG
Leu
>WENV182400742
OIER01000010
139743
Bacteroidota
GGG
Pro
>WENV182400951
OIER01000133
240012
Bacteroidota
CCC
Gly
>WENV182400817
OIER01000038
44852
Bacteroidota
TAA
Leu
>WENV182400950
OIER01000133
147439
Bacteroidota
TCT
Arg
>WENV182400790
OIER01000029
411550
Bacteroidota
CTG
Gln
>WENV182400791
OIER01000029
411550
Bacteroidota
CTG
Gln
>WENV182401509
OIER01002508
94703
Bacteroidota
GTA
Tyr
>WENV182400844
OIER01000059
185921
Bacteroidota
GTC
Asp
>WENV182400845
OIER01000059
185921
Bacteroidota
GTC
Asp
>WENV182401198
OIER01000518
23696
Bacteroidota
GCT
Ser
>WENV182400759
OIER01000017
56823
Bacteroidota
TGA
Ser
>WENV182400761
OIER01000018
56823
Bacteroidota
TGA
Ser
>WENV182401472
OIER01002092
56823
Bacteroidota
TGA
Ser
>WENV182400763
OIER01000018
16224
Bacteroidota
GGA
Ser
>WENV182400797
OIER01000031
16220
Bacteroidota
GGA
Ser
>WENV182400832
OIER01000050
338125
Bacteroidota
CCT
Arg
>WENV182400897
OIER01000090
235129
Bacteroidota
GCC
Gly
>WENV182400971
OIER01000144
235129
Bacteroidota
GCC
Gly
>WENV182400973
OIER01000144
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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