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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182408184
OIFE01001392
37213
Bacillota
TGA
Ser
>WENV182408134
OIFE01001008
144612
Bacillota
TCT
Arg
>WENV182408158
OIFE01001151
235098
Bacillota
GAC
Val
>WENV182408265
OIFE01002624
235098
Bacillota
GAC
Val
>WENV182407839
OIFE01000085
338152
Bacillota
TTC
Glu
>WENV182408314
OIFE01004662
44854
Bacillota
TGA
Ser
>WENV182408186
OIFE01001407
37071
Bacillota
TGA
Ser
>WENV182407925
OIFE01000187
59312
Bacillota
CAG
Leu
>WENV182408337
OIFE01005792
59312
Bacillota
CAG
Leu
>WENV182408194
OIFE01001508
238910
Bacillota
CTT
Lys
>WENV182407827
OIFE01000076
338147
Bacillota
CTC
Glu
>WENV182408009
OIFE01000374
338147
Bacillota
CTC
Glu
>WENV182408401
OIFE01011678
235137
Bacillota
TGC
Ala
>WENV182408162
OIFE01001190
235091
Bacillota
CTT
Lys
>WENV182407923
OIFE01000187
44859
Bacillota
AAG
Leu
>WENV182407924
OIFE01000187
44859
Bacillota
AAG
Leu
>WENV182408215
OIFE01001779
11034
Bacillota
GGA
Ser
>WENV182408465
OIFE01027846
114002
Bacillota
CAA
Leu
>WENV182408066
OIFE01000542
235079
Bacillota
GAA
Phe
>WENV182408209
OIFE01001670
235079
Bacillota
GAA
Phe
>WENV182408390
OIFE01010116
16266
Bacillota
GCT
Ser
>WENV182408159
OIFE01001161
338149
Bacillota
CTC
Glu
>WENV182408218
OIFE01001828
245298
Bacillota
CGG
Pro
>WENV182408385
OIFE01009593
37269
Bacillota
TGA
Ser
>WENV182408470
OIFE01029438
340131
Bacillota
GTT
Asn
>WENV182407879
OIFE01000122
155089
Bacillota
CAT
Met
>WENV182408379
OIFE01009179
413152
Bacillota
TCC
Gly
>WENV182408454
OIFE01022644
152492
Bacillota
GGG
Pro
>WENV182408087
OIFE01000656
152492
Bacillota
GGG
Pro
>WENV182408412
OIFE01012794
153911
Bacillota
GAT
Ile
>WENV182408347
OIFE01006174
144610
Bacillota
GTG
His
>WENV182408217
OIFE01001828
411547
Bacillota
CTG
Gln
>WENV182408313
OIFE01004615
147684
Bacillota
ACG
Arg
>WENV182408315
OIFE01004662
4624
Bacillota
GCT
Ser
>WENV182407779
OIFE01000026
248683
Bacillota
TTT
Lys
>WENV182407831
OIFE01000078
248683
Bacillota
TTT
Lys
>WENV182408155
OIFE01001127
235095
Bacillota
GGT
Thr
>WENV182408156
OIFE01001127
235095
Bacillota
GGT
Thr
>WENV182407817
OIFE01000064
241471
Bacillota
TGC
Ala
>WENV182408273
OIFE01002921
241471
Bacillota
TGC
Ala
>WENV182408339
OIFE01006005
241471
Bacillota
TGC
Ala
>WENV182408195
OIFE01001525
411549
Bacillota
TTG
Gln
>WENV182407851
OIFE01000095
235142
Bacillota
CTT
Lys
>WENV182408100
OIFE01000775
235142
Bacillota
CTT
Lys
>WENV182408142
OIFE01001041
148188
Bacillota
CCG
Arg
>WENV182408378
OIFE01008977
148188
Bacillota
CCG
Arg
>WENV182408244
OIFE01002153
80612
Bacillota
GTA
Tyr
>WENV182408106
OIFE01000839
235124
Bacillota
TGG
Pro
>WENV182408079
OIFE01000618
338129
Bacillota
TGT
Thr
>WENV182408197
OIFE01001547
144583
Bacillota
ACG
Arg
>WENV182408417
OIFE01013275
247734
Bacillota
TGC
Ala
>WENV182408153
OIFE01001127
235171
Bacillota
CCA
Trp
>WENV182407807
OIFE01000054
238974
Bacillota
GAA
Phe
>WENV182408083
OIFE01000636
238974
Bacillota
GAA
Phe
>WENV182408160
OIFE01001161
144621
Bacillota
GTT
Asn
>WENV182408161
OIFE01001184
144621
Bacillota
GTT
Asn
>WENV182407815
OIFE01000064
243098
Bacillota
GGT
Thr
>WENV182408051
OIFE01000512
58712
Bacillota
CAG
Leu
>WENV182408090
OIFE01000690
245296
Bacillota
CCC
Gly
>WENV182407783
OIFE01000026
344240
Bacillota
GCC
Gly
>WENV182408092
OIFE01000695
144594
Bacillota
CAC
Val
>WENV182408008
OIFE01000374
95563
Bacillota
GTA
Tyr
>WENV182408472
OIFE01029480
413657
Bacillota
CCC
Gly
>WENV182407806
OIFE01000053
414486
Bacillota
CCC
Gly
>WENV182407993
OIFE01000326
114075
Bacillota
TAG
Leu
>WENV182408183
OIFE01001363
238945
Bacillota
GCC
Gly
>WENV182408067
OIFE01000542
249259
Bacillota
GCC
Gly
>WENV182408210
OIFE01001670
249259
Bacillota
GCC
Gly
>WENV182408394
OIFE01010725
338131
Bacillota
GCC
Gly
>WENV182408239
OIFE01001998
338128
Bacillota
TTC
Glu
>WENV182408250
OIFE01002206
338128
Bacillota
TTC
Glu
>WENV182407980
OIFE01000292
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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