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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182407762
OIFE01000016
235097
Bacteroidota
TTT
Lys
>WENV182407772
OIFE01000023
235102
Bacteroidota
CGT
Thr
>WENV182407906
OIFE01000164
144657
Bacteroidota
CGG
Pro
>WENV182407843
OIFE01000087
338155
Bacteroidota
CTC
Glu
>WENV182408193
OIFE01001490
150845
Bacteroidota
GTC
Asp
>WENV182407733
OIFE01000001
343138
Bacteroidota
CCT
Arg
>WENV182407876
OIFE01000117
343138
Bacteroidota
CCT
Arg
>WENV182408050
OIFE01000510
58715
Bacteroidota
GAG
Leu
>WENV182407854
OIFE01000097
46165
Bacteroidota
TGA
Ser
>WENV182407792
OIFE01000032
338486
Bacteroidota
CAT
Met
>WENV182407796
OIFE01000037
338486
Bacteroidota
CAT
Met
>WENV182407799
OIFE01000044
415410
Bacteroidota
TTG
Gln
>WENV182407939
OIFE01000212
59689
Bacteroidota
CAG
Leu
>WENV182407735
OIFE01000002
80835
Bacteroidota
GTA
Tyr
>WENV182408072
OIFE01000585
80835
Bacteroidota
GTA
Tyr
>WENV182408327
OIFE01005353
80835
Bacteroidota
GTA
Tyr
>WENV182407927
OIFE01000189
145504
Bacteroidota
TGT
Thr
>WENV182408438
OIFE01018068
235182
Bacteroidota
>WENV182407793
OIFE01000035
338124
Bacteroidota
CCG
Arg
>WENV182407820
OIFE01000066
235203
Bacteroidota
TTT
Lys
>WENV182407852
OIFE01000097
238121
Bacteroidota
CTT
Lys
>WENV182407748
OIFE01000007
338132
Bacteroidota
GCA
Cys
>WENV182407976
OIFE01000285
338132
Bacteroidota
GCA
Cys
>WENV182407996
OIFE01000336
338132
Bacteroidota
GCA
Cys
>WENV182408331
OIFE01005517
338132
Bacteroidota
GCA
Cys
>WENV182408343
OIFE01006127
338132
Bacteroidota
GCA
Cys
>WENV182407853
OIFE01000097
45423
Bacteroidota
TGA
Ser
>WENV182407991
OIFE01000323
58714
Bacteroidota
CAA
Leu
>WENV182407930
OIFE01000189
235165
Bacteroidota
CCA
Trp
>WENV182408189
OIFE01001428
144933
Bacteroidota
TCT
Arg
>WENV182407731
OIFE01000001
149691
Bacteroidota
GTT
Asn
>WENV182407732
OIFE01000001
149691
Bacteroidota
GTT
Asn
>WENV182407790
OIFE01000030
144656
Bacteroidota
GTG
His
>WENV182408032
OIFE01000446
235207
Bacteroidota
CAT
Met
>WENV182407846
OIFE01000093
144659
Bacteroidota
GTG
His
>WENV182407907
OIFE01000164
235180
Bacteroidota
CCA
Trp
>WENV182408311
OIFE01004496
144596
Bacteroidota
GGC
Ala
>WENV182408330
OIFE01005516
144596
Bacteroidota
GGC
Ala
>WENV182407763
OIFE01000016
80607
Bacteroidota
GTA
Tyr
>WENV182407887
OIFE01000142
113604
Bacteroidota
>WENV182407890
OIFE01000142
113604
Bacteroidota
>WENV182407845
OIFE01000093
80614
Bacteroidota
>WENV182407895
OIFE01000154
95559
Bacteroidota
TAG
Leu
>WENV182407885
OIFE01000135
144655
Bacteroidota
GGC
Ala
>WENV182407877
OIFE01000121
95875
Bacteroidota
TAG
Leu
>WENV182407938
OIFE01000211
240012
Bacteroidota
CCC
Gly
>WENV182407738
OIFE01000003
44852
Bacteroidota
TAA
Leu
>WENV182407912
OIFE01000167
147439
Bacteroidota
TCT
Arg
>WENV182407844
OIFE01000091
150485
Bacteroidota
GTT
Asn
>WENV182407811
OIFE01000059
411550
Bacteroidota
CTG
Gln
>WENV182408328
OIFE01005353
338165
Bacteroidota
GGT
Thr
>WENV182407800
OIFE01000046
239647
Bacteroidota
TTT
Lys
>WENV182408208
OIFE01001661
239647
Bacteroidota
TTT
Lys
>WENV182408280
OIFE01003038
23696
Bacteroidota
GCT
Ser
>WENV182407914
OIFE01000174
16224
Bacteroidota
GGA
Ser
>WENV182408031
OIFE01000433
16220
Bacteroidota
GGA
Ser
>WENV182407739
OIFE01000003
338125
Bacteroidota
CCT
Arg
>WENV182408281
OIFE01003042
338125
Bacteroidota
CCT
Arg
>WENV182407920
OIFE01000185
235129
Bacteroidota
GCC
Gly
>WENV182408291
OIFE01003530
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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