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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182414444
OIFZ01000259
196621
Bacillota
GTC
Asp
>WENV182414438
OIFZ01000219
309417
Bacillota
GGC
Ala
>WENV182414436
OIFZ01000209
144612
Bacillota
TCT
Arg
>WENV182414460
OIFZ01000366
235098
Bacillota
GAC
Val
>WENV182414511
OIFZ01002781
338152
Bacillota
TTC
Glu
>WENV182414463
OIFZ01000437
44854
Bacillota
TGA
Ser
>WENV182414601
OIFZ01012889
37071
Bacillota
TGA
Ser
>WENV182414454
OIFZ01000312
304022
Bacillota
GCC
Gly
>WENV182414619
OIFZ01019952
429443
Bacillota
GCA
Cys
>WENV182414482
OIFZ01000976
307003
Bacillota
TGC
Ala
>WENV182414605
OIFZ01013721
338147
Bacillota
CTC
Glu
>WENV182414556
OIFZ01006199
340802
Bacillota
TTG
Gln
>WENV182414542
OIFZ01005290
429429
Bacillota
CCA
Trp
>WENV182414480
OIFZ01000907
11034
Bacillota
GGA
Ser
>WENV182414453
OIFZ01000312
235079
Bacillota
GAA
Phe
>WENV182414526
OIFZ01003848
338149
Bacillota
CTC
Glu
>WENV182414555
OIFZ01006199
144610
Bacillota
GTG
His
>WENV182414411
OIFZ01000118
411547
Bacillota
CTG
Gln
>WENV182414464
OIFZ01000437
4624
Bacillota
GCT
Ser
>WENV182414620
OIFZ01020335
412387
Bacillota
GCA
Cys
>WENV182414445
OIFZ01000260
235095
Bacillota
GGT
Thr
>WENV182414470
OIFZ01000549
235095
Bacillota
GGT
Thr
>WENV182414457
OIFZ01000327
411549
Bacillota
TTG
Gln
>WENV182414561
OIFZ01006942
235142
Bacillota
CTT
Lys
>WENV182414428
OIFZ01000195
148188
Bacillota
CCG
Arg
>WENV182414472
OIFZ01000591
80612
Bacillota
GTA
Tyr
>WENV182414497
OIFZ01001732
235124
Bacillota
TGG
Pro
>WENV182414462
OIFZ01000406
338129
Bacillota
TGT
Thr
>WENV182414405
OIFZ01000108
144583
Bacillota
ACG
Arg
>WENV182414443
OIFZ01000259
235171
Bacillota
CCA
Trp
>WENV182414483
OIFZ01000989
144621
Bacillota
GTT
Asn
>WENV182414502
OIFZ01002179
58712
Bacillota
CAG
Leu
>WENV182414469
OIFZ01000504
245296
Bacillota
CCC
Gly
>WENV182414536
OIFZ01004723
245296
Bacillota
CCC
Gly
>WENV182414467
OIFZ01000480
272992
Bacillota
CTT
Lys
>WENV182414554
OIFZ01006199
157635
Bacillota
TCT
Arg
>WENV182414455
OIFZ01000315
144594
Bacillota
CAC
Val
>WENV182414513
OIFZ01002781
95563
Bacillota
GTA
Tyr
>WENV182414459
OIFZ01000363
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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