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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182414743
OIGA01000315
196621
Bacillota
GTC
Asp
>WENV182414744
OIGA01000329
309417
Bacillota
GGC
Ala
>WENV182414794
OIGA01001583
309417
Bacillota
GGC
Ala
>WENV182414752
OIGA01000461
144612
Bacillota
TCT
Arg
>WENV182414755
OIGA01000485
235098
Bacillota
GAC
Val
>WENV182414768
OIGA01000953
235098
Bacillota
GAC
Val
>WENV182414904
OIGA01015639
338152
Bacillota
TTC
Glu
>WENV182414715
OIGA01000140
44854
Bacillota
TGA
Ser
>WENV182414770
OIGA01001008
304022
Bacillota
GCC
Gly
>WENV182414874
OIGA01010764
338147
Bacillota
CTC
Glu
>WENV182414836
OIGA01006095
235137
Bacillota
TGC
Ala
>WENV182414866
OIGA01009240
340802
Bacillota
TTG
Gln
>WENV182414814
OIGA01003283
429429
Bacillota
CCA
Trp
>WENV182414888
OIGA01012796
44859
Bacillota
AAG
Leu
>WENV182414731
OIGA01000237
11034
Bacillota
GGA
Ser
>WENV182414769
OIGA01001008
235079
Bacillota
GAA
Phe
>WENV182414838
OIGA01006219
152492
Bacillota
GGG
Pro
>WENV182414865
OIGA01009240
144610
Bacillota
GTG
His
>WENV182414765
OIGA01000858
411547
Bacillota
CTG
Gln
>WENV182414892
OIGA01013134
147684
Bacillota
ACG
Arg
>WENV182414716
OIGA01000140
4624
Bacillota
GCT
Ser
>WENV182414898
OIGA01014502
313164
Bacillota
TTT
Lys
>WENV182414738
OIGA01000274
235095
Bacillota
GGT
Thr
>WENV182414787
OIGA01001345
235095
Bacillota
GGT
Thr
>WENV182414864
OIGA01009240
152151
Bacillota
TCT
Arg
>WENV182414773
OIGA01001024
411549
Bacillota
TTG
Gln
>WENV182414879
OIGA01011658
235142
Bacillota
CTT
Lys
>WENV182414713
OIGA01000139
148188
Bacillota
CCG
Arg
>WENV182414766
OIGA01000883
235124
Bacillota
TGG
Pro
>WENV182414774
OIGA01001127
235124
Bacillota
TGG
Pro
>WENV182414758
OIGA01000537
338129
Bacillota
TGT
Thr
>WENV182414729
OIGA01000233
144583
Bacillota
ACG
Arg
>WENV182414742
OIGA01000315
235171
Bacillota
CCA
Trp
>WENV182414718
OIGA01000157
144621
Bacillota
GTT
Asn
>WENV182414740
OIGA01000306
58712
Bacillota
CAG
Leu
>WENV182414739
OIGA01000304
245296
Bacillota
CCC
Gly
>WENV182414799
OIGA01002086
245296
Bacillota
CCC
Gly
>WENV182414737
OIGA01000272
144594
Bacillota
CAC
Val
>WENV182414746
OIGA01000333
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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