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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182415088
OIGB01001420
196621
Bacillota
GTC
Asp
>WENV182415049
OIGB01000309
309417
Bacillota
GGC
Ala
>WENV182415077
OIGB01000970
144612
Bacillota
TCT
Arg
>WENV182415080
OIGB01001060
235098
Bacillota
GAC
Val
>WENV182415152
OIGB01005103
235098
Bacillota
GAC
Val
>WENV182415095
OIGB01001489
307003
Bacillota
TGC
Ala
>WENV182415142
OIGB01004654
59312
Bacillota
CAG
Leu
>WENV182415207
OIGB01012025
338147
Bacillota
CTC
Glu
>WENV182415200
OIGB01010558
41154
Bacillota
TAA
Leu
>WENV182415160
OIGB01005485
44859
Bacillota
AAG
Leu
>WENV182415073
OIGB01000823
11034
Bacillota
GGA
Ser
>WENV182415150
OIGB01004800
11034
Bacillota
GGA
Ser
>WENV182415047
OIGB01000305
338149
Bacillota
CTC
Glu
>WENV182415050
OIGB01000315
245298
Bacillota
CGG
Pro
>WENV182415170
OIGB01007109
37269
Bacillota
TGA
Ser
>WENV182415193
OIGB01009449
162445
Bacillota
CAT
Met
>WENV182415221
OIGB01014688
153911
Bacillota
GAT
Ile
>WENV182415022
OIGB01000164
411547
Bacillota
CTG
Gln
>WENV182415075
OIGB01000862
235095
Bacillota
GGT
Thr
>WENV182415089
OIGB01001420
235095
Bacillota
GGT
Thr
>WENV182415151
OIGB01004973
235095
Bacillota
GGT
Thr
>WENV182415052
OIGB01000330
411549
Bacillota
TTG
Gln
>WENV182415210
OIGB01012202
235142
Bacillota
CTT
Lys
>WENV182415031
OIGB01000190
148188
Bacillota
CCG
Arg
>WENV182415027
OIGB01000171
80612
Bacillota
GTA
Tyr
>WENV182415064
OIGB01000583
80612
Bacillota
GTA
Tyr
>WENV182415045
OIGB01000287
235124
Bacillota
TGG
Pro
>WENV182415098
OIGB01001916
235124
Bacillota
TGG
Pro
>WENV182415070
OIGB01000723
338129
Bacillota
TGT
Thr
>WENV182415055
OIGB01000390
144583
Bacillota
ACG
Arg
>WENV182415087
OIGB01001420
235171
Bacillota
CCA
Trp
>WENV182415020
OIGB01000142
144621
Bacillota
GTT
Asn
>WENV182415023
OIGB01000166
58712
Bacillota
CAG
Leu
>WENV182415056
OIGB01000393
245296
Bacillota
CCC
Gly
>WENV182415048
OIGB01000305
272992
Bacillota
CTT
Lys
>WENV182415051
OIGB01000317
144594
Bacillota
CAC
Val
>WENV182415122
OIGB01003550
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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