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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182415334
OIGC01000114
235102
Bacteroidota
CGT
Thr
>WENV182415522
OIGC01015893
338155
Bacteroidota
CTC
Glu
>WENV182415368
OIGC01000309
436206
Bacteroidota
TTG
Gln
>WENV182415273
OIGC01000006
338124
Bacteroidota
CCG
Arg
>WENV182415467
OIGC01005118
338132
Bacteroidota
GCA
Cys
>WENV182415465
OIGC01004972
301449
Bacteroidota
CGG
Pro
>WENV182415300
OIGC01000037
141414
Bacteroidota
GGG
Pro
>WENV182415403
OIGC01001146
141414
Bacteroidota
GGG
Pro
>WENV182415292
OIGC01000025
144656
Bacteroidota
GTG
His
>WENV182415271
OIGC01000004
235207
Bacteroidota
CAT
Met
>WENV182415436
OIGC01002803
144596
Bacteroidota
GGC
Ala
>WENV182415317
OIGC01000077
80607
Bacteroidota
GTA
Tyr
>WENV182415308
OIGC01000047
144590
Bacteroidota
GTT
Asn
>WENV182415319
OIGC01000081
95559
Bacteroidota
TAG
Leu
>WENV182415296
OIGC01000034
144655
Bacteroidota
GGC
Ala
>WENV182415428
OIGC01002355
425638
Bacteroidota
CTG
Gln
>WENV182415350
OIGC01000218
56823
Bacteroidota
TGA
Ser
>WENV182415391
OIGC01000775
56823
Bacteroidota
TGA
Ser
>WENV182415293
OIGC01000025
16224
Bacteroidota
GGA
Ser
>WENV182415299
OIGC01000037
16220
Bacteroidota
GGA
Ser
>WENV182415272
OIGC01000005
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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