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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182421759
OIGT01017672
144657
Bacteroidota
CGG
Pro
>WENV182421696
OIGT01007384
338155
Bacteroidota
CTC
Glu
>WENV182421732
OIGT01014062
58715
Bacteroidota
GAG
Leu
>WENV182421653
OIGT01003642
46165
Bacteroidota
TGA
Ser
>WENV182421624
OIGT01002399
338486
Bacteroidota
CAT
Met
>WENV182421615
OIGT01001812
59689
Bacteroidota
CAG
Leu
>WENV182421610
OIGT01001462
235203
Bacteroidota
TTT
Lys
>WENV182421652
OIGT01003642
238121
Bacteroidota
CTT
Lys
>WENV182421562
OIGT01000112
126641
Bacteroidota
TAC
Val
>WENV182421596
OIGT01000971
338132
Bacteroidota
GCA
Cys
>WENV182421709
OIGT01009242
58714
Bacteroidota
CAA
Leu
>WENV182421679
OIGT01005580
144933
Bacteroidota
TCT
Arg
>WENV182421676
OIGT01005390
235180
Bacteroidota
CCA
Trp
>WENV182421603
OIGT01001198
16999
Bacteroidota
GGA
Ser
>WENV182421684
OIGT01005902
80614
Bacteroidota
>WENV182421592
OIGT01000889
338164
Bacteroidota
TTC
Glu
>WENV182421577
OIGT01000324
95875
Bacteroidota
TAG
Leu
>WENV182421600
OIGT01001151
411550
Bacteroidota
CTG
Gln
>WENV182421690
OIGT01006804
338165
Bacteroidota
GGT
Thr
>WENV182421570
OIGT01000176
50727
Bacteroidota
TGA
Ser
>WENV182421602
OIGT01001198
50727
Bacteroidota
TGA
Ser
>WENV182421661
OIGT01003969
132360
Bacteroidota
GGG
Pro
>WENV182421662
OIGT01003983
425638
Bacteroidota
CTG
Gln
>WENV182421786
OIGT01027434
239647
Bacteroidota
TTT
Lys
>WENV182421609
OIGT01001435
23696
Bacteroidota
GCT
Ser
>WENV182421613
OIGT01001680
338125
Bacteroidota
CCT
Arg
>WENV182421607
OIGT01001283
235129
Bacteroidota
GCC
Gly
>WENV182421559
OIGT01000025
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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