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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182425696
OIHM01000061
235097
Bacteroidota
TTT
Lys
>WENV182425705
OIHM01000087
235097
Bacteroidota
TTT
Lys
>WENV182425809
OIHM01004382
235102
Bacteroidota
CGT
Thr
>WENV182425668
OIHM01000017
338155
Bacteroidota
CTC
Glu
>WENV182425662
OIHM01000010
95618
Bacteroidota
TAG
Leu
>WENV182425670
OIHM01000019
48053
Bacteroidota
TGA
Ser
>WENV182425722
OIHM01000146
48053
Bacteroidota
TGA
Ser
>WENV182425725
OIHM01000160
415410
Bacteroidota
TTG
Gln
>WENV182425654
OIHM01000001
411543
Bacteroidota
CTG
Gln
>WENV182425685
OIHM01000034
235182
Bacteroidota
>WENV182425661
OIHM01000008
338124
Bacteroidota
CCG
Arg
>WENV182425671
OIHM01000019
338132
Bacteroidota
GCA
Cys
>WENV182425701
OIHM01000084
338132
Bacteroidota
GCA
Cys
>WENV182425716
OIHM01000124
144688
Bacteroidota
CAT
Met
>WENV182425747
OIHM01000392
144933
Bacteroidota
TCT
Arg
>WENV182425674
OIHM01000025
149691
Bacteroidota
GTT
Asn
>WENV182425698
OIHM01000066
144656
Bacteroidota
GTG
His
>WENV182425693
OIHM01000052
235207
Bacteroidota
CAT
Met
>WENV182425697
OIHM01000064
235207
Bacteroidota
CAT
Met
>WENV182425669
OIHM01000018
144596
Bacteroidota
GGC
Ala
>WENV182425708
OIHM01000104
80607
Bacteroidota
GTA
Tyr
>WENV182425712
OIHM01000117
144590
Bacteroidota
GTT
Asn
>WENV182425713
OIHM01000117
144590
Bacteroidota
GTT
Asn
>WENV182425689
OIHM01000040
95559
Bacteroidota
TAG
Leu
>WENV182425699
OIHM01000075
419272
Bacteroidota
CTG
Gln
>WENV182425754
OIHM01000513
144655
Bacteroidota
GGC
Ala
>WENV182425657
OIHM01000002
338314
Bacteroidota
CCT
Arg
>WENV182425688
OIHM01000038
44852
Bacteroidota
TAA
Leu
>WENV182425683
OIHM01000031
338165
Bacteroidota
GGT
Thr
>WENV182425660
OIHM01000006
16224
Bacteroidota
GGA
Ser
>WENV182425718
OIHM01000130
16220
Bacteroidota
GGA
Ser
>WENV182425720
OIHM01000138
338125
Bacteroidota
CCT
Arg
>WENV182425711
OIHM01000116
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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