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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182426625
OIHQ01003927
144612
Bacillota
TCT
Arg
>WENV182426540
OIHQ01000870
235098
Bacillota
GAC
Val
>WENV182426572
OIHQ01001459
44854
Bacillota
TGA
Ser
>WENV182426636
OIHQ01004524
304022
Bacillota
GCC
Gly
>WENV182426652
OIHQ01006223
235137
Bacillota
TGC
Ala
>WENV182426560
OIHQ01001265
11034
Bacillota
GGA
Ser
>WENV182426712
OIHQ01014950
156937
Bacillota
GTG
His
>WENV182426582
OIHQ01001746
338149
Bacillota
CTC
Glu
>WENV182426568
OIHQ01001433
245298
Bacillota
CGG
Pro
>WENV182426694
OIHQ01011559
153911
Bacillota
GAT
Ile
>WENV182426567
OIHQ01001433
411547
Bacillota
CTG
Gln
>WENV182426573
OIHQ01001459
4624
Bacillota
GCT
Ser
>WENV182426645
OIHQ01005329
235095
Bacillota
GGT
Thr
>WENV182426661
OIHQ01006906
411549
Bacillota
TTG
Gln
>WENV182426650
OIHQ01006137
148188
Bacillota
CCG
Arg
>WENV182426547
OIHQ01001062
235124
Bacillota
TGG
Pro
>WENV182426528
OIHQ01000695
338129
Bacillota
TGT
Thr
>WENV182426681
OIHQ01008796
157838
Bacillota
GTC
Asp
>WENV182426502
OIHQ01000309
144583
Bacillota
ACG
Arg
>WENV182426557
OIHQ01001227
144621
Bacillota
GTT
Asn
>WENV182426583
OIHQ01001746
144621
Bacillota
GTT
Asn
>WENV182426584
OIHQ01001810
58712
Bacillota
CAG
Leu
>WENV182426643
OIHQ01005129
245296
Bacillota
CCC
Gly
>WENV182426604
OIHQ01002985
272992
Bacillota
CTT
Lys
>WENV182426610
OIHQ01003323
144594
Bacillota
CAC
Val
>WENV182426562
OIHQ01001361
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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