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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182429256
OIIC01000131
339412
Bacteroidota
GGT
Thr
>WENV182429690
OIIC01031903
235102
Bacteroidota
CGT
Thr
>WENV182429300
OIIC01000445
237796
Bacteroidota
CGT
Thr
>WENV182429630
OIIC01020666
144657
Bacteroidota
CGG
Pro
>WENV182429458
OIIC01004707
338155
Bacteroidota
CTC
Glu
>WENV182429646
OIIC01023447
58715
Bacteroidota
GAG
Leu
>WENV182429650
OIIC01023951
46165
Bacteroidota
TGA
Ser
>WENV182429418
OIIC01002835
338486
Bacteroidota
CAT
Met
>WENV182429384
OIIC01001725
413663
Bacteroidota
CTG
Gln
>WENV182429298
OIIC01000416
436206
Bacteroidota
TTG
Gln
>WENV182429327
OIIC01000754
436206
Bacteroidota
TTG
Gln
>WENV182429274
OIIC01000259
147147
Bacteroidota
GTG
His
>WENV182429225
OIIC01000048
155123
Bacteroidota
GTT
Asn
>WENV182429616
OIIC01017657
238121
Bacteroidota
CTT
Lys
>WENV182429589
OIIC01014794
126641
Bacteroidota
TAC
Val
>WENV182429250
OIIC01000116
338132
Bacteroidota
GCA
Cys
>WENV182429310
OIIC01000594
338132
Bacteroidota
GCA
Cys
>WENV182429596
OIIC01016388
144933
Bacteroidota
TCT
Arg
>WENV182429603
OIIC01016887
144656
Bacteroidota
GTG
His
>WENV182429514
OIIC01007112
235207
Bacteroidota
CAT
Met
>WENV182429355
OIIC01001059
144596
Bacteroidota
GGC
Ala
>WENV182429296
OIIC01000388
412235
Bacteroidota
>WENV182429218
OIIC01000039
344769
Bacteroidota
CTC
Glu
>WENV182429219
OIIC01000039
344769
Bacteroidota
CTC
Glu
>WENV182429590
OIIC01014830
154643
Bacteroidota
CAT
Met
>WENV182429683
OIIC01029973
144655
Bacteroidota
GGC
Ala
>WENV182429515
OIIC01007142
95875
Bacteroidota
TAG
Leu
>WENV182429313
OIIC01000637
139743
Bacteroidota
GGG
Pro
>WENV182429255
OIIC01000131
95986
Bacteroidota
GTA
Tyr
>WENV182429576
OIIC01013571
338165
Bacteroidota
GGT
Thr
>WENV182429286
OIIC01000307
425638
Bacteroidota
CTG
Gln
>WENV182429220
OIIC01000039
146764
Bacteroidota
GTC
Asp
>WENV182429341
OIIC01000827
59498
Bacteroidota
GAG
Leu
>WENV182429439
OIIC01003894
55270
Bacteroidota
TGA
Ser
>WENV182429309
OIIC01000592
16224
Bacteroidota
GGA
Ser
>WENV182429207
OIIC01000010
127023
Bacteroidota
GGG
Pro
>WENV182429578
OIIC01013797
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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