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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182432988
OIIQ01000140
235098
Bacillota
GAC
Val
>WENV182433023
OIIQ01001744
44854
Bacillota
TGA
Ser
>WENV182433032
OIIQ01002543
37071
Bacillota
TGA
Ser
>WENV182433007
OIIQ01000604
338147
Bacillota
CTC
Glu
>WENV182433006
OIIQ01000569
44859
Bacillota
AAG
Leu
>WENV182433021
OIIQ01001668
11034
Bacillota
GGA
Ser
>WENV182433014
OIIQ01001292
235079
Bacillota
GAA
Phe
>WENV182433024
OIIQ01001744
4624
Bacillota
GCT
Ser
>WENV182433008
OIIQ01000964
235095
Bacillota
GGT
Thr
>WENV182433002
OIIQ01000316
235142
Bacillota
CTT
Lys
>WENV182433005
OIIQ01000555
80612
Bacillota
GTA
Tyr
>WENV182433050
OIIQ01005641
235124
Bacillota
TGG
Pro
>WENV182433035
OIIQ01003147
338129
Bacillota
TGT
Thr
>WENV182433054
OIIQ01008665
144583
Bacillota
ACG
Arg
>WENV182433039
OIIQ01003931
235171
Bacillota
CCA
Trp
>WENV182433010
OIIQ01001036
58712
Bacillota
CAG
Leu
>WENV182433053
OIIQ01007373
245296
Bacillota
CCC
Gly
>WENV182432997
OIIQ01000193
95563
Bacillota
GTA
Tyr
>WENV182433051
OIIQ01006047
238945
Bacillota
GCC
Gly
>WENV182433015
OIIQ01001292
249259
Bacillota
GCC
Gly
>WENV182433045
OIIQ01004904
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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