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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182434522
OIIY01000628
144612
Bacillota
TCT
Arg
>WENV182434500
OIIY01000292
235098
Bacillota
GAC
Val
>WENV182434602
OIIY01005323
246023
Bacillota
TGC
Ala
>WENV182434620
OIIY01006070
341763
Bacillota
CTC
Glu
>WENV182434584
OIIY01004025
37083
Bacillota
TGA
Ser
>WENV182434592
OIIY01005278
11034
Bacillota
GGA
Ser
>WENV182434678
OIIY01013565
18852
Bacillota
GCT
Ser
>WENV182434521
OIIY01000581
235095
Bacillota
GGT
Thr
>WENV182434490
OIIY01000183
411549
Bacillota
TTG
Gln
>WENV182434542
OIIY01001330
148188
Bacillota
CCG
Arg
>WENV182434575
OIIY01003002
80612
Bacillota
GTA
Tyr
>WENV182434598
OIIY01005285
235127
Bacillota
TTT
Lys
>WENV182434595
OIIY01005285
147674
Bacillota
TCT
Arg
>WENV182434524
OIIY01000668
235124
Bacillota
TGG
Pro
>WENV182434467
OIIY01000109
144583
Bacillota
ACG
Arg
>WENV182434541
OIIY01001317
235171
Bacillota
CCA
Trp
>WENV182434568
OIIY01002644
58712
Bacillota
CAG
Leu
>WENV182434558
OIIY01002343
245296
Bacillota
CCC
Gly
>WENV182434506
OIIY01000363
144594
Bacillota
CAC
Val
>WENV182434563
OIIY01002406
272488
Bacillota
GAA
Phe
>WENV182434577
OIIY01003282
272488
Bacillota
GAA
Phe
>WENV182434641
OIIY01008099
157105
Bacillota
GAT
Ile
>WENV182434471
OIIY01000112
338128
Bacillota
TTC
Glu
>WENV182434659
OIIY01010635
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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