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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182435210
OIJC01000003
235097
Bacteroidota
TTT
Lys
>WENV182435271
OIJC01000138
235102
Bacteroidota
CGT
Thr
>WENV182435228
OIJC01000014
243025
Bacteroidota
CAT
Met
>WENV182435351
OIJC01004073
339341
Bacteroidota
GGT
Thr
>WENV182435418
OIJC01013763
58715
Bacteroidota
GAG
Leu
>WENV182435330
OIJC01001907
46165
Bacteroidota
TGA
Ser
>WENV182435267
OIJC01000117
17323
Bacteroidota
GGA
Ser
>WENV182435344
OIJC01002864
338486
Bacteroidota
CAT
Met
>WENV182435260
OIJC01000094
415410
Bacteroidota
TTG
Gln
>WENV182435325
OIJC01001558
59689
Bacteroidota
CAG
Leu
>WENV182435229
OIJC01000016
344692
Bacteroidota
GGT
Thr
>WENV182435239
OIJC01000039
341950
Bacteroidota
>WENV182435213
OIJC01000007
338124
Bacteroidota
CCG
Arg
>WENV182435275
OIJC01000167
338132
Bacteroidota
GCA
Cys
>WENV182435274
OIJC01000163
193809
Bacteroidota
CAT
Met
>WENV182435337
OIJC01002371
235165
Bacteroidota
CCA
Trp
>WENV182435252
OIJC01000069
144656
Bacteroidota
GTG
His
>WENV182435257
OIJC01000085
235207
Bacteroidota
CAT
Met
>WENV182435341
OIJC01002649
235180
Bacteroidota
CCA
Trp
>WENV182435233
OIJC01000022
52358
Bacteroidota
TGA
Ser
>WENV182435265
OIJC01000113
52358
Bacteroidota
TGA
Ser
>WENV182435223
OIJC01000014
154643
Bacteroidota
CAT
Met
>WENV182435221
OIJC01000013
144590
Bacteroidota
GTT
Asn
>WENV182435262
OIJC01000097
95559
Bacteroidota
TAG
Leu
>WENV182435245
OIJC01000051
419272
Bacteroidota
CTG
Gln
>WENV182435241
OIJC01000040
144655
Bacteroidota
GGC
Ala
>WENV182435328
OIJC01001878
144639
Bacteroidota
GGC
Ala
>WENV182435429
OIJC01016905
240012
Bacteroidota
CCC
Gly
>WENV182435220
OIJC01000013
44852
Bacteroidota
TAA
Leu
>WENV182435240
OIJC01000039
132360
Bacteroidota
GGG
Pro
>WENV182435304
OIJC01000482
353927
Bacteroidota
TTC
Glu
>WENV182435396
OIJC01008781
23696
Bacteroidota
GCT
Ser
>WENV182435234
OIJC01000026
414426
Bacteroidota
CTG
Gln
>WENV182435268
OIJC01000131
16224
Bacteroidota
GGA
Ser
>WENV182435288
OIJC01000210
16220
Bacteroidota
GGA
Ser
>WENV182435230
OIJC01000017
338125
Bacteroidota
CCT
Arg
>WENV182435359
OIJC01004715
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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