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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182438264
OIJM01000025
235097
Bacteroidota
TTT
Lys
>WENV182438252
OIJM01000009
235102
Bacteroidota
CGT
Thr
>WENV182438250
OIJM01000007
415410
Bacteroidota
TTG
Gln
>WENV182438248
OIJM01000003
338124
Bacteroidota
CCG
Arg
>WENV182438266
OIJM01000028
338132
Bacteroidota
GCA
Cys
>WENV182438288
OIJM01000174
193809
Bacteroidota
CAT
Met
>WENV182438281
OIJM01000088
144656
Bacteroidota
GTG
His
>WENV182438277
OIJM01000044
235207
Bacteroidota
CAT
Met
>WENV182438261
OIJM01000016
80607
Bacteroidota
GTA
Tyr
>WENV182438270
OIJM01000031
80607
Bacteroidota
GTA
Tyr
>WENV182438267
OIJM01000031
144590
Bacteroidota
GTT
Asn
>WENV182438268
OIJM01000031
144590
Bacteroidota
GTT
Asn
>WENV182438273
OIJM01000035
95559
Bacteroidota
TAG
Leu
>WENV182438275
OIJM01000040
419272
Bacteroidota
CTG
Gln
>WENV182438251
OIJM01000008
144655
Bacteroidota
GGC
Ala
>WENV182438259
OIJM01000015
50727
Bacteroidota
TGA
Ser
>WENV182438286
OIJM01000111
50727
Bacteroidota
TGA
Ser
>WENV182438274
OIJM01000040
132360
Bacteroidota
GGG
Pro
>WENV182438283
OIJM01000092
16224
Bacteroidota
GGA
Ser
>WENV182438257
OIJM01000014
16220
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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