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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182439485
OIJT01000028
235097
Bacteroidota
TTT
Lys
>WENV182439468
OIJT01000004
235102
Bacteroidota
CGT
Thr
>WENV182439471
OIJT01000008
436206
Bacteroidota
TTG
Gln
>WENV182439467
OIJT01000003
338124
Bacteroidota
CCG
Arg
>WENV182439498
OIJT01000059
338132
Bacteroidota
GCA
Cys
>WENV182439472
OIJT01000009
301449
Bacteroidota
CGG
Pro
>WENV182439506
OIJT01000093
144656
Bacteroidota
GTG
His
>WENV182439497
OIJT01000045
235207
Bacteroidota
CAT
Met
>WENV182439488
OIJT01000036
80607
Bacteroidota
GTA
Tyr
>WENV182439491
OIJT01000036
144590
Bacteroidota
GTT
Asn
>WENV182439492
OIJT01000036
144590
Bacteroidota
GTT
Asn
>WENV182439478
OIJT01000017
95559
Bacteroidota
TAG
Leu
>WENV182439479
OIJT01000020
144655
Bacteroidota
GGC
Ala
>WENV182439495
OIJT01000041
139743
Bacteroidota
GGG
Pro
>WENV182439475
OIJT01000013
55270
Bacteroidota
TGA
Ser
>WENV182439509
OIJT01000107
55270
Bacteroidota
TGA
Ser
>WENV182439503
OIJT01000067
16224
Bacteroidota
GGA
Ser
>WENV182439499
OIJT01000060
16220
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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