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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182439738
OIJV01006756
436206
Bacteroidota
TTG
Gln
>WENV182439723
OIJV01004480
338124
Bacteroidota
CCG
Arg
>WENV182439692
OIJV01000962
338132
Bacteroidota
GCA
Cys
>WENV182439684
OIJV01000346
301449
Bacteroidota
CGG
Pro
>WENV182439753
OIJV01010510
144656
Bacteroidota
GTG
His
>WENV182439715
OIJV01002700
143169
Bacteroidota
GGG
Pro
>WENV182439756
OIJV01011121
144596
Bacteroidota
GGC
Ala
>WENV182439689
OIJV01000628
80607
Bacteroidota
GTA
Tyr
>WENV182439742
OIJV01007649
144590
Bacteroidota
GTT
Asn
>WENV182439728
OIJV01004727
144655
Bacteroidota
GGC
Ala
>WENV182439696
OIJV01001401
56823
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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