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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182440138
OIJX01001240
196621
Bacillota
GTC
Asp
>WENV182440065
OIJX01000133
309417
Bacillota
GGC
Ala
>WENV182440200
OIJX01006213
144612
Bacillota
TCT
Arg
>WENV182440181
OIJX01004605
304022
Bacillota
GCC
Gly
>WENV182440184
OIJX01004792
246023
Bacillota
TGC
Ala
>WENV182440222
OIJX01008501
235137
Bacillota
TGC
Ala
>WENV182440221
OIJX01008476
341763
Bacillota
CTC
Glu
>WENV182440265
OIJX01016705
144668
Bacillota
GTC
Asp
>WENV182440115
OIJX01000749
11034
Bacillota
GGA
Ser
>WENV182440180
OIJX01004605
235079
Bacillota
GAA
Phe
>WENV182440092
OIJX01000339
338149
Bacillota
CTC
Glu
>WENV182440134
OIJX01001097
245298
Bacillota
CGG
Pro
>WENV182440183
OIJX01004792
201704
Bacillota
GAT
Ile
>WENV182440060
OIJX01000109
411547
Bacillota
CTG
Gln
>WENV182440133
OIJX01001097
411547
Bacillota
CTG
Gln
>WENV182440141
OIJX01001322
235095
Bacillota
GGT
Thr
>WENV182440120
OIJX01000841
411549
Bacillota
TTG
Gln
>WENV182440107
OIJX01000539
148188
Bacillota
CCG
Arg
>WENV182440111
OIJX01000606
80612
Bacillota
GTA
Tyr
>WENV182440086
OIJX01000289
235124
Bacillota
TGG
Pro
>WENV182440059
OIJX01000108
144583
Bacillota
ACG
Arg
>WENV182440137
OIJX01001240
235171
Bacillota
CCA
Trp
>WENV182440093
OIJX01000339
144621
Bacillota
GTT
Asn
>WENV182440154
OIJX01002589
58712
Bacillota
CAG
Leu
>WENV182440072
OIJX01000181
245296
Bacillota
CCC
Gly
>WENV182440139
OIJX01001250
272992
Bacillota
CTT
Lys
>WENV182440145
OIJX01001753
144594
Bacillota
CAC
Val
>WENV182440084
OIJX01000286
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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