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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182440987
OIKB01000513
196621
Bacillota
GTC
Asp
>WENV182440968
OIKB01000229
309417
Bacillota
GGC
Ala
>WENV182440972
OIKB01000304
144612
Bacillota
TCT
Arg
>WENV182440977
OIKB01000369
235098
Bacillota
GAC
Val
>WENV182440964
OIKB01000186
44854
Bacillota
TGA
Ser
>WENV182440985
OIKB01000513
304022
Bacillota
GCC
Gly
>WENV182441038
OIKB01004314
144668
Bacillota
GTC
Asp
>WENV182441053
OIKB01006527
429429
Bacillota
CCA
Trp
>WENV182441039
OIKB01004314
41154
Bacillota
TAA
Leu
>WENV182440999
OIKB01000746
11034
Bacillota
GGA
Ser
>WENV182440986
OIKB01000513
235117
Bacillota
TAC
Val
>WENV182441058
OIKB01007737
235079
Bacillota
GAA
Phe
>WENV182440966
OIKB01000224
338149
Bacillota
CTC
Glu
>WENV182440994
OIKB01000687
245298
Bacillota
CGG
Pro
>WENV182441014
OIKB01001631
411547
Bacillota
CTG
Gln
>WENV182440965
OIKB01000186
4624
Bacillota
GCT
Ser
>WENV182440976
OIKB01000311
235095
Bacillota
GGT
Thr
>WENV182441010
OIKB01001354
411549
Bacillota
TTG
Gln
>WENV182440970
OIKB01000264
148188
Bacillota
CCG
Arg
>WENV182441027
OIKB01002802
80612
Bacillota
GTA
Tyr
>WENV182441040
OIKB01004678
235127
Bacillota
TTT
Lys
>WENV182441026
OIKB01002802
338129
Bacillota
TGT
Thr
>WENV182440963
OIKB01000173
144583
Bacillota
ACG
Arg
>WENV182440989
OIKB01000537
235171
Bacillota
CCA
Trp
>WENV182440967
OIKB01000224
144621
Bacillota
GTT
Asn
>WENV182440974
OIKB01000304
58712
Bacillota
CAG
Leu
>WENV182441033
OIKB01003607
245296
Bacillota
CCC
Gly
>WENV182440961
OIKB01000141
144594
Bacillota
CAC
Val
>WENV182440960
OIKB01000137
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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