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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182441447
OIKD01000004
235097
Bacteroidota
TTT
Lys
>WENV182441503
OIKD01000104
235102
Bacteroidota
CGT
Thr
>WENV182441452
OIKD01000006
243025
Bacteroidota
CAT
Met
>WENV182441563
OIKD01002451
153993
Bacteroidota
GAT
Ile
>WENV182441559
OIKD01002031
339341
Bacteroidota
GGT
Thr
>WENV182441646
OIKD01010503
343138
Bacteroidota
CCT
Arg
>WENV182441489
OIKD01000069
17323
Bacteroidota
GGA
Ser
>WENV182441594
OIKD01004993
338486
Bacteroidota
CAT
Met
>WENV182441455
OIKD01000012
436206
Bacteroidota
TTG
Gln
>WENV182441449
OIKD01000005
344692
Bacteroidota
GGT
Thr
>WENV182441454
OIKD01000009
338124
Bacteroidota
CCG
Arg
>WENV182441572
OIKD01002665
126641
Bacteroidota
TAC
Val
>WENV182441507
OIKD01000146
338132
Bacteroidota
GCA
Cys
>WENV182441597
OIKD01005708
235165
Bacteroidota
CCA
Trp
>WENV182441472
OIKD01000032
301449
Bacteroidota
CGG
Pro
>WENV182441674
OIKD01016013
144933
Bacteroidota
TCT
Arg
>WENV182441482
OIKD01000049
144656
Bacteroidota
GTG
His
>WENV182441483
OIKD01000050
235207
Bacteroidota
CAT
Met
>WENV182441446
OIKD01000004
143169
Bacteroidota
GGG
Pro
>WENV182441484
OIKD01000053
143169
Bacteroidota
GGG
Pro
>WENV182441570
OIKD01002623
235180
Bacteroidota
CCA
Trp
>WENV182441486
OIKD01000055
80607
Bacteroidota
GTA
Tyr
>WENV182441558
OIKD01002031
80614
Bacteroidota
>WENV182441481
OIKD01000048
154643
Bacteroidota
CAT
Met
>WENV182441488
OIKD01000067
144590
Bacteroidota
GTT
Asn
>WENV182441497
OIKD01000092
95559
Bacteroidota
TAG
Leu
>WENV182441458
OIKD01000014
144655
Bacteroidota
GGC
Ala
>WENV182441671
OIKD01015744
144639
Bacteroidota
GGC
Ala
>WENV182441582
OIKD01004200
338164
Bacteroidota
TTC
Glu
>WENV182441609
OIKD01006704
95875
Bacteroidota
TAG
Leu
>WENV182441596
OIKD01005641
240012
Bacteroidota
CCC
Gly
>WENV182441519
OIKD01000280
353927
Bacteroidota
TTC
Glu
>WENV182441473
OIKD01000034
414426
Bacteroidota
CTG
Gln
>WENV182441443
OIKD01000002
56823
Bacteroidota
TGA
Ser
>WENV182441475
OIKD01000035
56823
Bacteroidota
TGA
Ser
>WENV182441504
OIKD01000117
16224
Bacteroidota
GGA
Ser
>WENV182441478
OIKD01000042
16220
Bacteroidota
GGA
Ser
>WENV182441445
OIKD01000003
338125
Bacteroidota
CCT
Arg
>WENV182441667
OIKD01014832
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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