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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182443078
OIKJ01000377
196621
Bacillota
GTC
Asp
>WENV182443150
OIKJ01005772
144612
Bacillota
TCT
Arg
>WENV182443063
OIKJ01000136
44854
Bacillota
TGA
Ser
>WENV182443135
OIKJ01003771
144577
Bacillota
GAT
Ile
>WENV182443164
OIKJ01008233
238910
Bacillota
CTT
Lys
>WENV182443137
OIKJ01003861
235150
Bacillota
TGC
Ala
>WENV182443132
OIKJ01003728
429429
Bacillota
CCA
Trp
>WENV182443120
OIKJ01002652
41154
Bacillota
TAA
Leu
>WENV182443093
OIKJ01001109
11034
Bacillota
GGA
Ser
>WENV182443134
OIKJ01003771
235087
Bacillota
TGC
Ala
>WENV182443069
OIKJ01000267
338149
Bacillota
CTC
Glu
>WENV182443088
OIKJ01000831
245298
Bacillota
CGG
Pro
>WENV182443087
OIKJ01000831
411547
Bacillota
CTG
Gln
>WENV182443064
OIKJ01000136
4624
Bacillota
GCT
Ser
>WENV182443061
OIKJ01000116
235095
Bacillota
GGT
Thr
>WENV182443089
OIKJ01000857
411549
Bacillota
TTG
Gln
>WENV182443098
OIKJ01001477
148188
Bacillota
CCG
Arg
>WENV182443146
OIKJ01004340
148188
Bacillota
CCG
Arg
>WENV182443116
OIKJ01002159
80612
Bacillota
GTA
Tyr
>WENV182443127
OIKJ01003130
235127
Bacillota
TTT
Lys
>WENV182443072
OIKJ01000302
235124
Bacillota
TGG
Pro
>WENV182443082
OIKJ01000666
338129
Bacillota
TGT
Thr
>WENV182443107
OIKJ01001648
144583
Bacillota
ACG
Arg
>WENV182443077
OIKJ01000377
235171
Bacillota
CCA
Trp
>WENV182443070
OIKJ01000267
144621
Bacillota
GTT
Asn
>WENV182443090
OIKJ01000883
58712
Bacillota
CAG
Leu
>WENV182443106
OIKJ01001605
58712
Bacillota
CAG
Leu
>WENV182443065
OIKJ01000193
245296
Bacillota
CCC
Gly
>WENV182443091
OIKJ01000969
272992
Bacillota
CTT
Lys
>WENV182443142
OIKJ01003973
272488
Bacillota
GAA
Phe
>WENV182443111
OIKJ01001830
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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