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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182443357
OIKM01002940
338155
Bacteroidota
CTC
Glu
>WENV182443336
OIKM01000215
95618
Bacteroidota
TAG
Leu
>WENV182443354
OIKM01002714
48053
Bacteroidota
TGA
Ser
>WENV182443364
OIKM01004041
338132
Bacteroidota
GCA
Cys
>WENV182443339
OIKM01000494
144688
Bacteroidota
CAT
Met
>WENV182443349
OIKM01002118
235207
Bacteroidota
CAT
Met
>WENV182443325
OIKM01000073
80607
Bacteroidota
GTA
Tyr
>WENV182443355
OIKM01002873
338314
Bacteroidota
CCT
Arg
>WENV182443326
OIKM01000073
338165
Bacteroidota
GGT
Thr
>WENV182443342
OIKM01000749
132360
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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